Software | Research Software Directory

swiftmhc

SwiftMHC is a deep learning algorithm for predicting pMHC structure and binding affinity at the same time.

deep learning
Protein-Protein Interaction
Transformer

("Jupyter Notebook")
(Mask)
(Python)
+ 1

3

2

tortellini

GitHub action to check whether any licensing issues exist for given software.

(JavaScript)
(TypeScript)

4

2

Pedestrian random walk in NetLogo (ch2.1)

A collection of methods for random walk in NetLogo, including various movement restrictions, biases, and algorithm alternatives.

4

1

Place them on the map

Multiple agent placement in specific geographical location. Set up an input number of agents (turtles) at an input location (cell or patch) in an grid holding the input spatial data (map).

5

1

Epidemic Network

Experimental environment for testing of large array of theoretical conditions for development epidemic event within various quantitative, spatial and connectedness (network structure) aspects.

2

1

Preferential Attachment Network

This NetLogo algorithm simulates network formation using preferential attachment. New nodes are more likely to connect to existing nodes with higher degrees, reflecting a "lottery" system where popular nodes attract more links.

1

Visualising GIS Rasters and Vector Data in NetLogo

This module provides a framework for importing and visualising GIS data in NetLogo. It supports continuous raster data visualised using colour gradients, binary and categorical raster data visualised using discrete colour assignments, and point-based vector data visualised as turtle agents.

1

AnisoVision

Data accompanying the publication: Characterization of the 3D-optical properties of van der Waals materials with deep learning based coherent Fourier scatterometry

anisotropic thin films
coherent Fourier scatterometry
deep learning metrology
+ 2

("Jupyter Notebook")
(Markdown)
(Other)

9

1

auction-tas

Truck Appointment Systems - Auction Based

Auction
competition
Scheduling
+ 2

("Jupyter Notebook")
(large-text-file)
(Markdown)
+ 2

1

Code and data belonging to the publication "Data-enabled Predictive Repetitive Control"

Data-driven control
Data-enabled Predictive Control
Fundamental Lemma
+ 2

(Markdown)
(Matlab)
(Other)

4

1

Code supporting the publication: Towards Backdoor Stealthiness in Model Parameter Space.

backdoor attack
computer vision
Convolutional neural networks
+ 4

(Markdown)
(Other)
(Python)

3

1

Code underlying the publication: "Video BagNet: short temporal receptive fields increase robustness in long-term action recognition"

3D-CNN
Action recognition
BagNet
+ 2

(Markdown)
(Other)
(Python)
+ 1

4

1