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Software for "Smart 3D super-resolution microscopy reveals the architecture of the RNA scaffold in a nuclear body"
Software for "Smart 3D super-resolution microscopy reveals the architecture of the RNA scaffold in a nuclear body"
1
mention
8
contributors
Description
This software repository contains the code accompanying the paper "Smart 3D super-resolution microscopy reveals the architecture of the RNA scaffold in a nuclear body". The repository includes a python algorithm to automatically detect and image paraspeckles using an Abberior STED microscope, as well as Matlab code to rotationally and translationally align the resulting paraspeckle images and perform shape and polarity analyses on them.
Keywords
License
- Apache-2.0
</>Source code
Not specified
Reference papers
Mentions
Contributors
AB
Ashwin Balakrishnan
BR
Bernd Rieger
EO
Ellen Kazumi Okuda
EB
Enya S. Berrevoets
LK
Laurell F. Kessler
MM
Michaela Müller-McNicoll
MH
Mike Heilemann
SS
Sjoerd Stallinga