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Software for "Smart 3D super-resolution microscopy reveals the architecture of the RNA scaffold in a nuclear body"

Software for "Smart 3D super-resolution microscopy reveals the architecture of the RNA scaffold in a nuclear body"

8
contributors

Description

This software repository contains the code accompanying the paper "Smart 3D super-resolution microscopy reveals the architecture of the RNA scaffold in a nuclear body". The repository includes a python algorithm to automatically detect and image paraspeckles using an Abberior STED microscope, as well as Matlab code to rotationally and translationally align the resulting paraspeckle images and perform shape and polarity analyses on them.

Logo of Software for "Smart 3D super-resolution microscopy reveals the architecture of the RNA scaffold in a nuclear body"
Keywords
Architectural RNA
Morphological Sorting
NEAT1
Paraspeckle
Polarization Analysis
Smart Microscopy
Spherical Harmonics
STED
Super-Resolution Microscopy
License
  • Apache-2.0
</>Source code
Not specified
Packages

Reference papers

Contributors

AB
EO
Ellen Kazumi Okuda
LK
Laurell F. Kessler

Member of community

4TU