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25-36 of 48

MMSODA Toolbox for MATLAB

MATLAB toolbox for global optimization and state estimation of dynamic models using distributed computing.

HTML
MATLAB
TeX
+ 5

OpenMS

OpenMS is an open-source software C++ library for LC-MS data management and analyses. It offers an infrastructure for rapid development of mass spectrometry related software. OpenMS is free software available under the three clause BSD license and runs under Windows, macOS, and Linux.

C++
mass spectrometry
metabolomics
+ 1

C++
MAXScript
Cython
+ 14

OpenPNM

OpenPNM is an open source project aiming to provide porous media researchers with a ready-made framework for performing a wide range of pore network simulations.

Pore network modeling

C++
MAXScript
Cython
+ 14

openPSTD

openPSTD is a Python-based research software that allows efficient and detailed calculation of sound propagation in a 2D built environment. It is especially useful as a reference tool for other developed software on acoustic sound propagation.

Acoustics
GPU
python

C++
C
GLSL
+ 3

Plus Toolkit

Toolkit for data acquisition, pre-processing, calibration, and real-time streaming of imaging, position tracking, and other sensor data for medical applications.

3D Slicer
electromagnetic tracking
image capture
+ 7

C++
C
CMake
+ 2

SimVascular

The only fully open source software package providing a complete pipeline from medical image data segmentation to patient specific blood flow simulation and analysis.

Cardiovascular
Fluid mechanics
Medical image computing
+ 1

C++
Tcl
Makefile
+ 9

Abinit

Abinit is a software package based on density functional theory for calculating the properties of solids.

Fortran
Python
M4
+ 15

Arpra

Arpra is a C library for analyzing the propagation of numerical error in arbitrary precision IEEE-754 floating-point computations.

Affine Arithmetic
Arbitrary Precision
Interval Arithmetic
+ 2

C
Makefile
M4

asrlitcompare

A tool written in rmarkdown for assessing the level of agreement between two raters following screening in ASReview. Users only need the two .csv files downloaded from ASReview, and the tool will automatically compile a summary report as an HTML file, viewable in your web browser.

ASReview
inter-rater reliability
literature screening
+ 1

HTML
C++
JavaScript
+ 14

CHAMP-EU

The Cornell-Holland Ab-initio Materials Package (CHAMP) is a quantum Monte Carlo suite of programs for electronic structure calculations. The code is developed by Claudia Filippi and Saverio Moroni, with significant contributions by Ravindra Shinde, N. Renaud, V. Azizi, E. Landinez, and S. Shepard.

Chemistry
High performance computing
Physics
+ 1

C
Fortran
Nemerle
+ 16

Compas Toolkit

The Compas Toolkit is a high-performance C++ library offering GPU-accelerated functions for use in quantitative MRI research.

GPU
High performance computing
MRI

Cuda
C++
Julia
+ 4

DuMux

DuMux is short for "DUNE for Multi-{Phase, Component, Scale, Physics, …} flow and transport in porous media". It is an open-source simulator and research code in modern C++. It provides a framework for the implementation and application of porous media model concepts and constitutive relations.

porous media
Simulation

C++
CMake
Python
+ 2