All software
SKAO Science Data Challenge 1 Solution Workflow
The SKA Science Data Challenge 1 (SDC1, https://astronomers.skatelescope.org/ska-science-data-challenge-1/) tasked participants with identifying and classifying sources in synthetic radio images. Here we present an environment and workflow for producing a solution to this challenge that can easil...
- astronomy
- Data
- Machine learning
- + 2
- Dockerfile
- Jupyter Notebook
- Makefile
- + 2
timewise-sup: The Timewise Subtraction Pipeline v0.5.1
The Timewise Subtraction Pipeline produces mid-infrared difference photometry based on measurements by the WISE satellite
- astronomy
- content: difference photometry
- Projects: WISE
- Python
- Shell
ZenodoCI
The library is intended to be part of a complete CI pipeline. This stage deploys to Zenodo the files found in the ./build directory, configured in the .gitlab-ci.yml file
- ESCAPE
- Dockerfile
- Python
- Shell
eWatercycle SURF Research Cloud
Codified instructions for deploying the eWaterCycle platform on the SURF Research Cloud.
- Jinja
- Python
- Shell
Explainable embeddings
Experiments with regard to explanation of embedded spaces and multi modal models.
- DIANNA
- Embedded spaces
- Explainable AI
- HTML
- Jupyter Notebook
- Python
- + 1
Folklore Clinical Variant Interpretation MCP
Folklore MCP 1.6.0: public variant evidence, gene resolution and profiles, ClinGen gene-disease associations and literature. 11 tools.
- ACMG/AMP
- bioinformatics
- clinical variant interpretation
- + 4
- Dockerfile
- JavaScript
- Jupyter Notebook
- + 2
GATE
GATE is open source, based on Geant4, and developed by the international OpenGATE collaboration
- Treatment Planning and dosimetry
- C
- C++
- CMake
- + 2
GEANT4
Toolkit for the simulation of the passage of particles through matter. Its areas of application include high energy, nuclear and accelerator physics.
- Treatment Planning and dosimetry
- C
- C++
- CMake
- + 5
GitHub action to set up singularity
To use Singularity containers in a GitHub action workflow you need to install it first. This GitHub Action downloads, compiles and installs it for you.
- Shell
- TypeScript
grpc4bmi
Run, read and write model state of a numerical simulation written in a variety of languages remotely from Python
- Multi-scale & multi model simulations
- C++
- CMake
- Dockerfile
- + 5
H2 scenario explorer
Web application to visualize hydrogen production scenarios as part of HyChain WP1
- energy transition
- renewable energy
- Visualization
- HTML
- JavaScript
- Shell
Hadrianus scripts
Scripts that transform cultural heritage relational databases into linked data by using cultural heritage ontologies.
- Inter-operability & linked data
- Perl
- Python
- Shell