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Cover image for QMflows

QMflows

Construction and efficient execution of computational chemistry workflows.

  • Multi-scale & multi model simulations
  • Workflow technologies
  • Python
  • Jupyter Notebook
  • Shell
3
50
Cover image for PROTEUS

PROTEUS

PROTEUS is a Python framework that simulates the coupled evolution of the atmospheres and interiors of rocky planets.

  • Exoplanets
  • model coupling
  • Jupyter Notebook
  • Python
  • Julia
  • + 1
13
49
Cover image for Netherlands eScience Center Python Template

Netherlands eScience Center Python Template

Generic template for Python packages, so you can spend less time setting up and configuring, and comply with the Netherlands eScience Center Software Development Guide from the start.

  • software development tools
  • software sustainability
  • template
  • Jinja
  • Python
  • Shell
23
46
Cover image for Vantage6

Vantage6

An open-source platform for supporting the development of federated learning projects

  • federated learning
  • healthcare
  • privacy preserving analysis
  • + 1
  • Python
  • TypeScript
  • HTML
  • + 6
8
45
Cover image for Research Software Directory

Research Software Directory

A content management system for research software, which promotes the visibility, reuse, and impact of research software.

  • FAIR
  • Research Software Impact
  • Software Citation
  • TypeScript
  • Java
  • PLpgSQL
  • + 7
25
38
Cover image for fsbrain

fsbrain

The fsbrain package provides visualization of neuroimaging data in R. The plots produced by fsbrain can be integrated into R notebooks or written to high-quality bitmap image files, ready for publication.

  • Computational Neuroscience
  • Visualization
  • R
  • Dockerfile
  • Shell
1
36
Cover image for 3D-e-Chem Virtual Machine

3D-e-Chem Virtual Machine

A freely available Virtual Machine encompassing tools, databases, and workflows for cheminformaticians, including new resources developed for ligand binding site comparisons and GPCR research.

  • Inter-operability & linked data
  • Workflow technologies
  • Shell
  • Smarty
2
33
Cover image for KLIFS KNIME nodes

KLIFS KNIME nodes

If you are working in the KNIME worflow platform and need data about your favorite kinase receptor ligand interaction, then these nodes are for you.

  • Workflow technologies
  • Java
  • Shell
  • Scala
2
33
Cover image for sv-callers

sv-callers

Highly portable parallel workflow to detect structural variants in cancer genomes.

  • Big data
  • High performance computing
  • Workflow technologies
  • Python
  • Shell
4
32
Cover image for 4CAT Capture & Analysis Toolkit

4CAT Capture & Analysis Toolkit

The 4CAT Capture and Analysis Toolkit provides modular data capture & analysis for a variety of social media platforms. Its goal is to make the capture and analysis of data from these platforms accessible to people through a web interface, without requiring any programming or web scraping skills.

  • Big data
  • python
  • Social media
  • + 1
  • Python
  • JavaScript
  • HTML
  • + 4
3
27
Cover image for Ersilia Model Hub

Ersilia Model Hub

The Ersilia Model Hub is an open source platform to serve AI/ML models for infectious disease drug discovery.

  • AI
  • Chemistry
  • Drug discovery
  • + 1
  • Python
  • Jupyter Notebook
  • Dockerfile
  • + 1
3
26
Cover image for OMUSE

OMUSE

A Python environment to interface and couple oceanographic and other earth system model codes.

  • High performance computing
  • Multi-scale & multi model simulations
  • Fortran
  • Python
  • HTML
  • + 10
8
25