All software
OpenDA
Open data assimilation toolbox. OpenDA is an open interface standard for a set of tools to quickly implement data-assimilation and calibration for arbitrary numerical models.
- Optimized data handling
- Java
- Fortran
- Python
- + 22
OpenSim Creator
A UI for building OpenSim models
- biomechanical engineering
- opensim
- Simulation
- C++
- GLSL
- CMake
- + 5
Orange Hackathon
Orange modules for text processing in the project What Works When for Whom
- Jupyter Notebook
- Python
- CSS
- + 2
oTree Development Environment
A Docker environment for programming against multiple oTree server
- oTree
- Makefile
- Shell
- Dockerfile
oTree Waiting Room
A load balancer for oTree servers.
- oTree
- JavaScript
- HTML
- Shell
Overture Arranger
Data can be messy, let Arranger organize it for you.
- JavaScript
- TypeScript
- CSS
- + 3
Overture Data Management System
Overture is a collection of open-source, extendable solutions for big-data genomic science that research institutions and individual researchers can use to support their work.
- authentication
- cloud storage
- genomics
- + 2
- Java
- Shell
- Dockerfile
- + 1
Overture Ego
A stateless authorization and user management service.
- Data Indexing
- Elasticsearch Automation
- Java
- Shell
- Makefile
- + 1
Overture Score
Transfer data quickly and easily to and from any cloud-based storage system.
- Cancer Genomics
- Cloud Storage & Transfer
- Java
- Shell
- Makefile
- + 1
Overture Song
Quickly and reliably track genome metadata scattered across multiple Cloud storage systems.
- Cancer Genomics
- Metadata Management
- Metadata Validation
- Java
- Python
- Shell
- + 7
PanTools-pipeline-v4
General purpose Snakemake pipeline for PanTools v4.
- Data Analysis
- genomics
- pangenomics
- Python
- Dockerfile
- Shell
ParticleDA.jl
Julia package to perform data assimilation with particle filters, supporting both thread-based parallelism and distributed processing using MPI.
- Data assimilation
- Julia Package
- Particle filter
- Julia
- Jupyter Notebook
- Shell