Software | Research Software Directory

LinkAhead

Open Source Research Data Management Software

Data
Electronic Lab Notebook
ETL
+ 9

(ANTLR)
(C++)
(CSS)
+ 9

6

26

MUSCLE3

MUSCLE3 is a coupling library for building multiscale simulations out of single-scale models.

High performance computing
Multi-scale & multi model simulations

(C)
(C++)
(Dockerfile)
+ 4

4

26

DeepRank2

DeepRank2 is an open-source deep learning framework for data mining of protein-protein interfaces or single-residue missense variants. This package is an improved and unified version of three previously developed packages: DeepRank, DeepRank-GNN and DeepRank-Mut.

Cancer vaccine
Convolutional Neural Network
Deep Learning Framework
+ 5

(Dockerfile)
("Jupyter Notebook")
(Python)
+ 1

12

25

mpcrl-greenhouse

Software underlying publication: Reinforcement learning-based model predictive control for greenhouse climate control

Agriculture
Greenhouse climate control
Model predictive control
+ 1

(Markdown)
(Other)
(Python)

2

24

PyBanshee, Python-based open source of the MATLAB toolbox BANSHEE.

Bayesian network models
Gaussian copula
Python package

6

24

Measurements.jl

Error propagation calculator and library for physical measurements. It supports real and complex numbers with uncertainty, arbitrary precision calculations, operations with arrays, and numerical integration.

error propagation
Julia Package
Physics
+ 1

(Julia)

1

24

Code underlying the publication: Forecasting estuarine salt intrusion in the Rhine-Meuse delta using an LSTM model

chloride
Delta
estuary
+ 7

4

23

DoE2Vec

DoE2Vec is a self-supervised approach to learn exploratory landscape analysis features from design of experiments. The model can be used for downstream meta-learning tasks such as learninig which optimizer works best on a given optimization landscape.

Machine learning
optimization
python

(Makefile)
(Python)
(R)

1

23

Code supporting the publication: Gromit: Benchmarking the performance and scalability of blockchain systems

Benchmarking
Blockchain
Performance
+ 1

(JSON)
(Markdown)
(Other)
+ 3

3

22

Cross-Domain Classification of Moral Values - code

Cross-domain
Ethics
Morality
+ 3

(Markdown)
(Other)
(Python)

5

22

Arena-Crowds

Arena-Crowds is Python scripts for the data analysis to estimate crowd density based on WiFi positioning.

Computer networks
Networks
Network Science

("Jupyter Notebook")
(Python)

3

22

DIANNA

Deep Insight And Neural Network Analysis, DIANNA is the only Explainable AI, XAI library for scientists supporting Open Neural Network Exchange, ONNX - the de facto standard models format.

Explainable AI
Image processing
Machine learning
+ 2

("Jupyter Notebook")
(Python)
(TeX)

12

22