All software
PSSMGen
Generates consistent PSSM and PDB files for protein-protein complexes
- Big data
- High performance computing
- Optimized data handling
- Python
- Makefile
3D Slicer
3D Slicer is a free, open source software for visualization, processing, segmentation, registration, and analysis of medical, biomedical, and other 3D images and meshes; and planning and navigating image-guided procedures.
- 3D
- 3DSlicer
- Extension
- + 7
- C++
- Python
- CMake
- + 5
Code underlying the publication: "RESTAD: Reconstruction and Similarity Transformer for time series Anomaly Detection"
Code underlying the publication: "RESTAD: Reconstruction and Similarity Transformer for time series Anomaly Detection"
- Anomaly detection
- Radial Basis Function (RBF) kernel
- Time Series
- + 1
- Python
- YAML
- Markdown
- + 1
IUI2025_ConvXAI
User Interaction Dataset associated with IUI 2025 paper "Is Conversational XAI All You Need? Human-AI Decision Making With a Conversational XAI Assistant"
- Appropriate Reliance
- Conversational XAI Interface
- Human-AI Decision Making
- Jupyter Notebook
- Python
- Other
- + 1
MagnumPI - Potential Integrator
A package for the calculation of scattering angles and cross sections.
- Inter-operability & linked data
- Visualization
- C++
- Mathematica
- Python
- + 2
mexca
Capture emotion expressions from video, audio, and text with a single pipeline.
- Audio processing
- Image processing
- Machine learning
- + 1
- Python
- Dockerfile
- Shell
PIQMIe
A web tool for mass spectrometry-based proteomics data analyses
- Data Analysis
- mass spectrometry
- Optimized data handling
- + 2
- HTML
- JavaScript
- Python
- + 3
sv-channels
Genome-wide detection of structural variants using deep learning
- Machine learning
- Python
- Jupyter Notebook
- R
- + 1
Code for Detecting Anomalous Misconfigurations in AWS Identity and Access Management Policies
Code for Detecting Anomalous Misconfigurations in AWS Identity and Access Management Policies
- Identity and Access Management
- Misconfiguration Detection
- Security
- Python
- Markdown
- Other
petcluster
Petrochemical cluster analysis tool
- complex networks
- Industrial cluster
- industrial ecology
- + 2
- Python
- Other
- Markdown
cffconvert
Command line tool to convert CITATION.cff files to various formats used by reference managers such as Zotero and JabRef.
- Python
- TeX
- HTML
- + 1
evidence
doc2vec-based assisted close reading with support for abstract concept-based search and context-based search
- Text analysis & natural language processing
- TypeScript
- Go
- Jupyter Notebook
- + 5