All software
Metasyn
Metasyn is a Python tool for synthetic data generation. It is geared towards use-cases where privacy is of the utmost importance. Metasyn emphasizes transparency and auditability of the outputs.
- disclosure
- generative models
- metadata
- + 3
- Dockerfile
- Python
Metriplane
Open-source Python software for workcell state observation, incident evidence, deterministic record/replay, and reproducible regression testing.
- ArUco
- benchmark evidence
- computer vision
- + 12
- CSS
- Dockerfile
- HTML
- + 3
MONAI
Project MONAI is revolutionizing medical imaging through a comprehensive ecosystem of AI tools
- Artificial Intelligence
- C
- C++
- Cuda
- + 4
MPET
This software is designed to run simulations of batteries with porous electrodes using porous electrode theory, which is a volume-averaged, multiscale approach to capture the coupled behavior of electrolyte and active material within electrodes
- Dockerfile
- Python
NanopubJL
JupyterLab extension to aid in searching and publishing of Nanopublications in a python notebook
- Inter-operability & linked data
- CSS
- Dockerfile
- JavaScript
- + 3
Noodle Biomedical Literature Discovery
Public, read-only biomedical literature search, publication inspection, and bounded citation and semantic graph traversal through a hosted MCP server.
- bioinformatics
- biomedical literature
- citation graph
- + 5
- Dockerfile
- Jupyter Notebook
- Python
- + 1
opynsim
Python-Native Musculoskeletal Modelling
- Batchfile
- BitBake
- C
- + 14
oTree Development Environment
A Docker environment for programming against multiple oTree server
- oTree
- Dockerfile
- Makefile
- Shell
Overture Data Management System
Overture is a collection of open-source, extendable solutions for big-data genomic science that research institutions and individual researchers can use to support their work.
- authentication
- cloud storage
- genomics
- + 2
- Dockerfile
- Java
- Makefile
- + 1
Overture Ego
A stateless authorization and user management service.
- Data Indexing
- Elasticsearch Automation
- Dockerfile
- Java
- Makefile
- + 1
Overture Maestro
Organizing your distributed data into one index.
- Data Indexing
- Elasticsearch Automation
- Dockerfile
- JavaScript
- Makefile
- + 1
Overture Score
Transfer data quickly and easily to and from any cloud-based storage system.
- Cancer Genomics
- Cloud Storage & Transfer
- Dockerfile
- Java
- Makefile
- + 1