All software
haddock3
Haddock3 (High Ambiguity Driven protein-protein DOCKing) is a modular software for for the integrative modeling and refinement of biomolecular complexes.
- biomolecular complexes
- docking
- energetics
- + 4
- BitBake
- C
- C++
- + 11
Parallel Ice Sheet Model (PISM)
An open-source modelling framework for ice sheets and glaciers
- C++
- geophysics
- Glacier
- + 5
- C
- C++
- CMake
- + 9
ESMValTool
The Earth System Model eValuation Tool is a community diagnostics and performance metrics tool for the evaluation of Earth System Models that allows for routine comparison of models and observations.
- Big data
- Optimized data handling
- Visualization
- + 1
- Dockerfile
- Emacs Lisp
- Jinja
- + 7
SAGECal
Fast, memory efficient and GPU accelerated radio interferometric calibration program
- Big data
- GPU
- High performance computing
- C
- C++
- CMake
- + 5
ESMValCore
ESMValTool Core: core functionalities and driver for ESMValTool, a community diagnostic and performance metrics tool for routine evaluation of Earth System Models in CMIP.
- Big data
- Optimized data handling
- Visualization
- + 1
- Dockerfile
- HTML
- JavaScript
- + 4
FAIR Data Point
RESTful web service that enables data owners to expose their data sets using rich machine-readable metadata.
- Big data
- Inter-operability & linked data
- Dockerfile
- Makefile
- Python
Scholia
Graphical User Interface around Wikidata that uses SPARQL to collect data
- Wikidata
- CSS
- Dockerfile
- HTML
- + 3
Paired omics data platform
If you do metabolomics experiments with mass spectra and have sequenced the genomes of the samples, then the platform can help you link them.
- Inter-operability & linked data
- CSS
- Dockerfile
- HTML
- + 3
MAGMa
MAGMa is an online application for the automatic chemical annotation of mass spectrometry data.
- Big data
- Visualization
- CSS
- Cython
- Dockerfile
- + 5
Ersilia Model Hub
The Ersilia Model Hub is an open source platform to serve AI/ML models for infectious disease drug discovery.
- AI
- Chemistry
- Drug discovery
- + 1
- Dockerfile
- Jupyter Notebook
- Python
4CAT Capture & Analysis Toolkit
The 4CAT Capture and Analysis Toolkit provides modular data capture & analysis for a variety of social media platforms. Its goal is to make the capture and analysis of data from these platforms accessible to people through a web interface, without requiring any programming or web scraping skills.
- Big data
- python
- Social media
- + 1
- CSS
- Dockerfile
- HTML
- + 4
grlc
Builds a web API from SPARQL queries hosted on GitHub to accessing triple store data.
- garlic
- Inter-operability & linked data
- CSS
- Dockerfile
- HTML
- + 4