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152 software items. Page 1 of 13. 12 items per page. 1 filters active.
1-12 of 152

haddock3

Haddock3 (High Ambiguity Driven protein-protein DOCKing) is a modular software for for the integrative modeling and refinement of biomolecular complexes.

  • biomolecular complexes
  • docking
  • energetics
  • + 4
  • BitBake
  • C
  • C++
  • + 11
12
7175

Parallel Ice Sheet Model (PISM)

An open-source modelling framework for ice sheets and glaciers

  • C++
  • geophysics
  • Glacier
  • + 5
  • C
  • C++
  • CMake
  • + 9
33
951

ESMValTool

The Earth System Model eValuation Tool is a community diagnostics and performance metrics tool for the evaluation of Earth System Models that allows for routine comparison of models and observations.

  • Big data
  • Optimized data handling
  • Visualization
  • + 1
  • Dockerfile
  • Emacs Lisp
  • Jinja
  • + 7
111
472

SAGECal

Fast, memory efficient and GPU accelerated radio interferometric calibration program

  • Big data
  • GPU
  • High performance computing
  • C
  • C++
  • CMake
  • + 5
4
218

ESMValCore

ESMValTool Core: core functionalities and driver for ESMValTool, a community diagnostic and performance metrics tool for routine evaluation of Earth System Models in CMIP.

  • Big data
  • Optimized data handling
  • Visualization
  • + 1
  • Dockerfile
  • HTML
  • JavaScript
  • + 4
55
162

FAIR Data Point

RESTful web service that enables data owners to expose their data sets using rich machine-readable metadata.

  • Big data
  • Inter-operability & linked data
  • Dockerfile
  • Makefile
  • Python
6
152

Scholia

Graphical User Interface around Wikidata that uses SPARQL to collect data

  • Wikidata
  • CSS
  • Dockerfile
  • HTML
  • + 3
4
137

Paired omics data platform

If you do metabolomics experiments with mass spectra and have sequenced the genomes of the samples, then the platform can help you link them.

  • Inter-operability & linked data
  • CSS
  • Dockerfile
  • HTML
  • + 3
2
131

MAGMa

MAGMa is an online application for the automatic chemical annotation of mass spectrometry data.

  • Big data
  • Visualization
  • CSS
  • Cython
  • Dockerfile
  • + 5
3
111

Ersilia Model Hub

The Ersilia Model Hub is an open source platform to serve AI/ML models for infectious disease drug discovery.

  • AI
  • Chemistry
  • Drug discovery
  • + 1
  • Dockerfile
  • Jupyter Notebook
  • Python
3
89

grlc

Builds a web API from SPARQL queries hosted on GitHub to accessing triple store data.

  • garlic
  • Inter-operability & linked data
  • CSS
  • Dockerfile
  • HTML
  • + 4
3
87

powerfit

Rigid body fitting of atomic strucures in cryo-electron microscopy density maps

  • cryo-electron microscopy
  • macromolecular structure
  • map fitting
  • C
  • Cuda
  • Dockerfile
  • + 3
6
71