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Software

ESMValTool

ES

The Earth System Model eValuation Tool is a community diagnostics and performance metrics tool for the evaluation of Earth System Models that allows for routine comparison of models and observations.

Updated 8 months ago
81 84

Research Software Directory

RE

A content management system tailored to research software.

Updated 8 months ago
23 13

Twiqs

TW

Software behind the web server twiqs.nl, which has provided free access to statistics about Dutch tweets since 2010

Updated 8 months ago
20 1

compareMS2

CO

compareMS2 is a tool for direct comparison of tandem mass spectrometry datasets, typically from liquid chromatography-tandem mass spectrometry (LC-MS/MS), defining a distance as a function of the share of similar spectra. Applications span biomedicine, phylogenetics, forensics and food science.

Updated 3 months ago
14 2

Xenon

XE

If you are using remote machines to do your computations, and don’t feel like learning and implementing many different APIs, Xenon is the tool for you.

Updated 3 months ago
13 11

sv-callers

SV

Highly portable parallel workflow to detect structural variants in cancer genomes.

Updated 8 months ago
12 4

DIANNA

DI

Deep Insight And Neural Network Analysis, DIANNA is the only Explainable AI, XAI library for scientists supporting Open Neural Network Exchange, ONNX - the de facto standard models format.

Updated 2 months ago
11 10

DALES

DA

DALES is a large-eddy simulation code designed for studies of the physics of the atmospheric boundary layer, including convective and stable boundary layers as well as cloudy boundary layers.

Updated 5 months ago
10 24

MDStudio

MD

A tool to run molecular dynamics workflows.

Updated 8 months ago
10 4

pbg-ld

PB

Access integrated data on genes and associated traits in plants

Updated 8 months ago
9 3

QTLTableMiner++

QT

Extract gene-trait associations from scientific literature

Updated 8 months ago
9 2

Xenon command line interface

XE

A command line interface for the Xenon library that allows you to use remote machines to do your computations.

Updated 8 months ago
9 2