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Software

BridgeDb Java

BR

Java library for identifier mapping

Updated 6 months ago
117 18

ESMValTool

ES

The Earth System Model eValuation Tool is a community diagnostics and performance metrics tool for the evaluation of Earth System Models that allows for routine comparison of models and observations.

Updated 5 days ago
82 84

Research Software Directory

RE

A content management system tailored to research software.

Updated 14 months ago
23 13

Twiqs

TW

Software behind the web server twiqs.nl, which has provided free access to statistics about Dutch tweets since 2010

Updated 14 months ago
20 1

compareMS2

CO

compareMS2 is a tool for direct comparison of tandem mass spectrometry datasets, typically from liquid chromatography-tandem mass spectrometry (LC-MS/MS), defining a distance as a function of the share of similar spectra. Applications span biomedicine, phylogenetics, forensics and food science.

Updated 10 months ago
14 2

Xenon

XE

If you are using remote machines to do your computations, and don’t feel like learning and implementing many different APIs, Xenon is the tool for you.

Updated 9 months ago
13 11

Research Software Directory (Next Generation)

RE

A content management system for research software, which promotes the visibility, re-use and impact of research software.

Updated 6 months ago
13 9

sv-callers

SV

Highly portable parallel workflow to detect structural variants in cancer genomes.

Updated 14 months ago
12 4

DALES

DA

DALES is a large-eddy simulation code designed for studies of the physics of the atmospheric boundary layer, including convective and stable boundary layers as well as cloudy boundary layers.

Updated 11 months ago
10 24

MDStudio

MD

A tool to run molecular dynamics workflows.

Updated 14 months ago
10 4

pbg-ld

PB

Access integrated data on genes and associated traits in plants

Updated 14 months ago
9 4

QTLTableMiner++

QT

Extract gene-trait associations from scientific literature

Updated 14 months ago
9 3