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12 software items. Page 0 of 1. 12 items per page. 1 filters active.
1-12 of 12

COPASI

COPASI is an open source software for simulation and analysis of biochemical networks and their dynamics. It provides simulations using ODEs, SDEs, or Gillespie's stochastic simulation algorithm, with optional discrete events. COPASI provides several analyses, optimization, and parameter estimation.

  • Dynamics
  • optimization
  • Parameter estimation
  • + 3
  • Batchfile
  • C
  • C#
  • + 17
12
2923

ESMValTool

The Earth System Model eValuation Tool is a community diagnostics and performance metrics tool for the evaluation of Earth System Models that allows for routine comparison of models and observations.

  • Big data
  • Optimized data handling
  • Visualization
  • + 1
  • Dockerfile
  • Emacs Lisp
  • Jinja
  • + 7
111
468

CMLXOM

Java library for working with Chemical Markup Language files.

  • Chemical Markup Language
  • Chemistry
  • XML
  • Batchfile
  • HTML
  • Java
  • + 1
2
39

LinkAhead

Open Source Research Data Management Software

  • Data
  • Electronic Lab Notebook
  • ETL
  • + 9
  • ANTLR
  • C++
  • CSS
  • + 9
6
26

Geodisy

Geodisy is a research data discovery tool that harvests information from existing research data repositories and displays applicable records onto a map-based search interface.

  • geospatial
  • metadata
  • research data
  • CSS
  • HTML
  • Java
  • + 6
1
1

OpenMS

OpenMS is an open-source software C++ library for LC-MS data management and analyses. It offers an infrastructure for rapid development of mass spectrometry related software. OpenMS is free software available under the three clause BSD license and runs under Windows, macOS, and Linux.

  • C++
  • mass spectrometry
  • metabolomics
  • + 1
  • Batchfile
  • C
  • C++
  • + 14
27
1

openPSTD

openPSTD is a Python-based research software that allows efficient and detailed calculation of sound propagation in a 2D built environment. It is especially useful as a reference tool for other developed software on acoustic sound propagation.

  • Acoustics
  • GPU
  • python
  • C
  • C++
  • CMake
  • + 3
3
1

Canadian Writing Research Collaboratory (CWRC)

CWRC aims to make digital research methods broadly accessible, and to develop an active community of researchers engaged in exploring the potential of collaboration online.

  • Canadian culture & history
  • cultural studies
  • digital humanities
  • + 1
  • ActionScript
  • Batchfile
  • Classic ASP
  • + 16
1
0

CERR

CERR (pronounced 'sir'), stands for Computational Environment for Radiological Research. CERR is MATLAB based software platform for developing and sharing research results using radiation therapy treatment planning and imaging informatics.

  • Treatment Planning and dosimetry
  • AGS Script
  • Batchfile
  • C
  • + 20
0
0

dicom4che

dcm4che is a Java-based library and set of tools for working with DICOM files. It provides functionalities for reading, writing, and manipulating DICOM data, making it a valuable resource for developers and researchers working with medical imaging.

  • Software Engineering and Data Infrastructure
  • Batchfile
  • CSS
  • Go Template
  • + 4
0
0

DVTk

DVTk is an open-source project for testing, validating and diagnosing communication protocols and scenarios in medical environments. It supports DICOM, HL7 and IHE integration profiles.

  • Software Engineering and Data Infrastructure
  • Batchfile
  • C
  • C#
  • + 11
0
0

ROE

Designed for patient-specific prescription determination using personalized dose-response curves. Visualizes TCP and NTCP.

  • Treatment Planning and dosimetry
  • AGS Script
  • Batchfile
  • C
  • + 20
0
0