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Cover image for ExploreASL

ExploreASL

ExploreASL is a pipeline and toolbox for image processing and statistics of arterial spin labeling perfusion MR images. It is designed as a multi-OS, open-source, collaborative framework that facilitates cross-pollination between image processing method developers and clinical investigators.

  • ASL
  • Image processing
  • MRI
  • MATLAB
  • C
  • Python
7
11
Cover image for FastMLC

FastMLC

Detect clusters in for example large collections of DNA or protein sequences, and visualize the results in a web browser.

  • Big data
  • Machine learning
  • Visualization
  • C++
  • C
  • Makefile
  • + 5
5
11
Cover image for StoryTeller

StoryTeller

StoryTeller is a web application for visual analysis of textual data which can show you the connections between storylines, participants and other entities in complex humanities data.

  • Visualization
  • JavaScript
  • HTML
  • CSS
2
11
Cover image for LinkAhead

LinkAhead

Open Source Research Data Management Software

  • Data
  • ETL
  • Inter-operability & linked data
  • + 4
  • Java
  • Shell
  • Python
  • + 2
6
10
Cover image for MDStudio

MDStudio

A tool to run molecular dynamics workflows.

  • High performance computing
  • Real time data analysis
  • Workflow technologies
  • Python
  • CSS
  • TypeScript
  • + 5
4
10
Cover image for pbg-ld

pbg-ld

Access integrated data on genes and associated traits in plants

  • Data Analysis
  • genomics
  • Inter-operability & linked data
  • PLpgSQL
  • Shell
  • Python
  • + 2
4
9
Cover image for QTLTableMiner++

QTLTableMiner++

Extract gene-trait associations from scientific literature

  • Inter-operability & linked data
  • Text analysis & natural language processing
  • Java
  • Shell
3
9
Cover image for Xenon command line interface

Xenon command line interface

A command line interface for the Xenon library that allows you to use remote machines to do your computations.

  • High performance computing
  • Java
  • Common Workflow Language
  • Dockerfile
  • + 2
2
9
Cover image for BIAS

BIAS

A toolbox for detecting structural bias in continuous optimization heuristics.

  • Bias
  • Metaheuristics
  • optimization
  • + 1
  • Jupyter Notebook
  • Python
  • R
3
8
Cover image for Clustering Geo-data Cubes

Clustering Geo-data Cubes

Tool to perform cluster analysis of multi-dimensional geospatial data, running on local or distributed systems.

  • Big data
  • geospatial
  • Machine learning
  • + 1
  • Python
  • Jupyter Notebook
  • TeX
7
8
Cover image for OMUSE

OMUSE

A Python environment to interface and couple oceanographic and other earth system model codes.

  • High performance computing
  • Multi-scale & multi model simulations
  • Fortran
  • Python
  • HTML
  • + 10
8
8
Cover image for COVID-19 Piedmont

COVID-19 Piedmont

COVID-19 Surveillance Data Modelling and Management Pipeline in Piedmont.

  • Computational Epidemiology
  • COVID-19
  • COVID-19 Data
  • + 14
  • Julia
2
8