All software
ASTRA Toolbox
The ASTRA Toolbox is a Python and MATLAB library of flexible, high-performance GPU-accelerated primitives for 2D and 3D tomography.
- CT
- GPU
- Image reconstruction
- + 4
- (Batchfile)
- (C)
- (C++)
- + 8
DUNE (Distributed and Unified Numerics Environment)
DUNE, the Distributed and Unified Numerics Environment, is a modular toolbox for solving partial differential equations (PDEs) with grid-based methods. It supports the easy, flexible, and efficient implementation of finite element and volume methods. DUNE is C++ code and also has a Python interface.
- C++
- Grid-based PDE methods
- High performance computing
- + 5
- (C++)
- (CMake)
- (Hack)
- + 2
dtscalibration
A Python package to load raw Distributed Temperature Sensing (DTS) files, perform a calibration, and plot the result.
- calibration
- DTS
- fiber optic
- + 1
- ("Jupyter Notebook")
- (Python)
GSA report
GSAreport is an application to easily generate reports that describe the global sensitivities of your input parameters as best as possible. You can use the reporting application to inspect which features are important for a given real world function / simulator or model.
- Explainable AI
- Machine learning
- python
- + 1
- (CSS)
- (HTML)
- ("Jupyter Notebook")
- + 1
4CAT Capture & Analysis Toolkit
The 4CAT Capture and Analysis Toolkit provides modular data capture & analysis for a variety of social media platforms. Its goal is to make the capture and analysis of data from these platforms accessible to people through a web interface, without requiring any programming or web scraping skills.
- Big data
- python
- Social media
- + 1
- (CSS)
- (Dockerfile)
- (HTML)
- + 4
hyphe
A research-driven web-crawler aimed at building, curating and categorizing a corpus of web actors and the network graph of hyperlinks connecting them.
- crawling
- Networks
- python
- + 1
- (CSS)
- (Dockerfile)
- (HTML)
- + 3
InstaNovo
InstaNovo is a transformer neural network with the ability to translate fragment ion peaks into the sequence of amino acids that make up the studied peptide(s). InstaNovo+ is a multinomial diffusion model that further improves performance by iterative refinement of predicted sequences.
- deep learning
- Machine learning
- mass spectrometry
- + 1
- (Makefile)
- (Python)
LinkAhead
Open Source Research Data Management Software
- Data
- Electronic Lab Notebook
- ETL
- + 9
- (ANTLR)
- (C++)
- (CSS)
- + 9
DoE2Vec
DoE2Vec is a self-supervised approach to learn exploratory landscape analysis features from design of experiments. The model can be used for downstream meta-learning tasks such as learninig which optimizer works best on a given optimization landscape.
- Machine learning
- optimization
- python
- (Makefile)
- (Python)
- (R)
SLEPLET
SLEPLET is a Python package for the construction of Slepian wavelets in the spherical and manifold (via meshes) settings.
- manifolds
- python
- slepian functions
- + 2
- (Python)
- (TeX)
FAME_AMR_model
Data and code underlying Chapter 3 of the PhD thesis "Advanced Magnetocaloric Regenerators for Heat Pump Applications"
- layered AMR
- layering strategies
- magnetocaloric heat pump
- + 5
- (Other)
- (Python)
MapReader
MapReader is an end-to-end computer vision (CV) pipeline for exploring and analyzing images at scale.
- computer vision
- digital humanities
- geospatial
- + 4
- (Dockerfile)
- (Python)
- (Shell)
- + 1