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Cover image for ESMValTool

ESMValTool

The Earth System Model eValuation Tool is a community diagnostics and performance metrics tool for the evaluation of Earth System Models that allows for routine comparison of models and observations.

  • Big data
  • Optimized data handling
  • Visualization
  • + 1
  • NCL
  • Python
  • R
  • + 6
95
339
Cover image for Kernel Tuner

Kernel Tuner

Kernel Tuner greatly simplifies the development of highly-optimized and auto-tuned CUDA, OpenCL, and C code, supporting many advanced use-cases and optimization strategies that speed up the auto-tuning process.

  • Big data
  • GPU
  • High performance computing
  • + 3
  • Python
15
108
Cover image for ESMValCore

ESMValCore

ESMValTool Core: core functionalities and driver for ESMValTool, a community diagnostic and performance metrics tool for routine evaluation of Earth System Models in CMIP.

  • Big data
  • Optimized data handling
  • Visualization
  • + 1
  • Python
  • Jupyter Notebook
  • HTML
  • + 5
48
107
Cover image for matchms

matchms

Python library for fuzzy comparison of mass spectrum data and other Python objects

  • Big data
  • Optimized data handling
  • Python
  • TeX
  • Batchfile
  • + 1
14
90
Cover image for DeepRank

DeepRank

Deep learning framework for data mining protein-protein interactions using CNN

  • Big data
  • Machine learning
  • Optimized data handling
  • Python
  • R
  • C
  • + 2
8
79
Cover image for LinkAhead

LinkAhead

Open Source Research Data Management Software

  • Data
  • ETL
  • Inter-operability & linked data
  • + 4
  • Java
  • Shell
  • Python
  • + 2
6
12
Cover image for pdb2sql

pdb2sql

Fast and versatile Python package that leverages SQL queries to parse, manipulate and process biomolecular structure files. The structure files should be in the PDB format and are available on www.rcsb.org.

  • Big data
  • Optimized data handling
  • Python
  • TeX
  • Makefile
2
8
Cover image for recipy

recipy

Effortless provenance tracking in Python

  • Inter-operability & linked data
  • Optimized data handling
  • Python
  • HTML
  • Jupyter Notebook
  • + 2
2
8
Cover image for ece2cmor3

ece2cmor3

Process EC-Earth output to publish for CMIP6

  • Big data
  • High performance computing
  • Optimized data handling
  • Shell
  • Python
2
7
Cover image for PSSMGen

PSSMGen

Generates consistent PSSM and PDB files for protein-protein complexes

  • Big data
  • High performance computing
  • Optimized data handling
  • Python
  • Makefile
2
6
Cover image for PIQMIe

PIQMIe

A web tool for mass spectrometry-based proteomics data analyses

  • Data Analysis
  • mass spectrometry
  • Optimized data handling
  • + 2
  • HTML
  • JavaScript
  • Python
  • + 3
1
4
Cover image for ewatercycle

ewatercycle

The eWaterCycle package makes it easier to use hydrological models without having intimate knowledge about how to install and run the models.

  • Inter-operability & linked data
  • Multi-scale & multi model simulations
  • Optimized data handling
  • + 1
  • Python
  • Dockerfile
10
2