All software
ESMValTool
The Earth System Model eValuation Tool is a community diagnostics and performance metrics tool for the evaluation of Earth System Models that allows for routine comparison of models and observations.
- Big data
- Optimized data handling
- Visualization
- + 1
- NCL
- Python
- R
- + 7
ESMValCore
ESMValTool Core: core functionalities and driver for ESMValTool, a community diagnostic and performance metrics tool for routine evaluation of Earth System Models in CMIP.
- Big data
- Optimized data handling
- Visualization
- + 1
- Python
- Jupyter Notebook
- HTML
- + 5
Kernel Tuner
Kernel Tuner greatly simplifies the development of highly-optimized and auto-tuned CUDA, OpenCL, and C code, supporting many advanced use-cases and optimization strategies that speed up the auto-tuning process.
- Big data
- GPU
- High performance computing
- + 3
- Python
matchms
Python library for fuzzy comparison of mass spectrum data and other Python objects
- Big data
- Optimized data handling
- Python
- TeX
- Batchfile
- + 1
DeepRank
Deep learning framework for data mining protein-protein interactions using CNN
- Big data
- Machine learning
- Optimized data handling
- Python
- R
- C
- + 2
LinkAhead
Open Source Research Data Management Software
- Data
- ETL
- Inter-operability & linked data
- + 4
- Java
- Shell
- Python
- + 2
pdb2sql
Fast and versatile Python package that leverages SQL queries to parse, manipulate and process biomolecular structure files. The structure files should be in the PDB format and are available on www.rcsb.org.
- Big data
- Optimized data handling
- Python
- TeX
- Makefile
recipy
Effortless provenance tracking in Python
- Inter-operability & linked data
- Optimized data handling
- Python
- HTML
- Jupyter Notebook
- + 2
ece2cmor3
Process EC-Earth output to publish for CMIP6
- Big data
- High performance computing
- Optimized data handling
- Shell
- Python
PSSMGen
Generates consistent PSSM and PDB files for protein-protein complexes
- Big data
- High performance computing
- Optimized data handling
- Python
- Makefile
PIQMIe
A web tool for mass spectrometry-based proteomics data analyses
- Data Analysis
- mass spectrometry
- Optimized data handling
- + 2
- HTML
- JavaScript
- Python
- + 3
ewatercycle
The eWaterCycle package makes it easier to use hydrological models without having intimate knowledge about how to install and run the models.
- Inter-operability & linked data
- Multi-scale & multi model simulations
- Optimized data handling
- + 1
- Python
- Dockerfile