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mzRecal

mzRecal recalibrates mass spectrometry (MS1) data in mzML format, using peptide identifications in mzIdentML.

1
mention
2
contributors

What mzRecal can do for you

mzRecal recalibrates mass spectrometry (MS1) data in mzML format, using peptide identifications in mzIdentML.

  • mzRecal uses calibration functions based on the physics of the mass analyzer (FTICR, Orbitrap, TOF)
  • Consuming and producing data in open standard formats (mzML, mzIdentML)
  • Simple to plug into a data processing pipeline
  • Recalibrated data generally results in a higher number of high-confidence identifications

picture of recalibration result

Keywords
mass spectrometry
proteomics
Programming languages
  • Go 81%
  • R 7%
  • Shell 7%
  • Makefile 5%
License
  • MIT
</>Source code

Participating organisations

Leiden University Medical Center
ELIXIR

Mentions

Contributors

MP
Magnus Palmblad
RM
Rob Marissen