Jason Maassen
Research Software Directory
A content management system for research software, which promotes the visibility, reuse, and impact of research software.
- FAIR
- Research Software Impact
- Software Citation
- TypeScript
- Java
- PLpgSQL
- + 8
sv-callers
Highly portable parallel workflow to detect structural variants in cancer genomes.
- Big data
- High performance computing
- Workflow technologies
- Python
- Shell
LitStudy
Explore scientific literature using Python from the comfort of a Jupyter notebook
- Inter-operability & linked data
- Text analysis & natural language processing
- Visualization
- Python
- HTML
Xenon
If you are using remote machines to do your computations, and don’t feel like learning and implementing many different APIs, Xenon is the tool for you.
- batch-job
- distributed computing
- FTP
- + 11
- Java
- Shell
- Batchfile
Xenon gRPC server
Run applications remotely via a gRPC interface.
- High performance computing
- Java
PattyAnalytics
Library for aligning and scaling one point cloud to an other.
- Big data
- Point Cloud
- Python
Xenon Docker images
For your testing needs a collection of Docker images with different file systems and batch schedulers.
- High performance computing
- Workflow technologies
- Shell
- Dockerfile
- Roff
- + 4
sv-gen
Highly portable parallel workflow to generate artificial genomes with structural variants.
- Big data
- High performance computing
- Workflow technologies
- Python
- Shell
Structure from Motion
Construct 3D pointclouds from a set of 2D images
- Python
- Shell
- MATLAB
- + 2