Netherlands eScience Center
National platform for the development and application of domain overarching software and methods for the scientific community
Structure from Motion
Construct 3D pointclouds from a set of 2D images
- (Dockerfile)
- (Java)
- (MATLAB)
- + 2
sv-channels
Genome-wide detection of structural variants using deep learning
- Machine learning
- ("Jupyter Notebook")
- (Python)
- (R)
- + 1
sv-gen
Highly portable parallel workflow to generate artificial genomes with structural variants.
- Big data
- High performance computing
- Workflow technologies
- (Python)
- (Shell)
Swan
Swan is a Python package to create statistical models to predict molecular properties
- Machine learning
- ("Jupyter Notebook")
- (Python)
swiftmhc
SwiftMHC is a deep learning algorithm for predicting pMHC structure and binding affinity at the same time.
- deep learning
- Protein-Protein Interaction
- Transformer
- ("Jupyter Notebook")
- (Mask)
- (Python)
- + 1
swyft
swyft is the official implementation of Truncated Marginal Neural Ratio Estimation, a hyper-efficient, simulation-based inference technique for complex data and expensive simulators.
- Bayesian Inference
- Data Analysis
- ("Jupyter Notebook")
- (Python)
talkr
{talkr} is an R package that offers a set of convenience functions for quality control, visualisation and analysis of conversational data. Most notably it provides a range of plotting functions that play well with ggplot and the tidyverse.
- conversation
- talk
- turn-taking
- + 1
- (R)
- (Rez)
TaxoTagger
DNA barcode identification, powered by semantic searching.
- Fungi
- Machine learning
- semantic search
- + 3
- (Makefile)
- (Mustache)
- (Python)
TaxoTagger Webapp
Webapp for DNA barcode identification, powered by semantic searching.
- Fungi
- Machine learning
- semantic search
- + 3
- (Python)
Teachbook recombiner
Web app to pick chapters from a pre-defined list of TeachBooks and combine them into a new book using the new external table of content entry type
- (CSS)
- (HTML)
- (JavaScript)
- + 1
Texcavator
Texcavator is a search engine and text mining application for creating word cloud and time line visualizations of large text corpora.
- Text analysis & natural language processing
- Visualization
- (CSS)
- (HTML)
- (JavaScript)
- + 1
the FAIR extension
A web browser extension to evaluate Digital Object FAIRness developed at Maastricht University Library.
- FAIR assessment
- FAIR Digital Objects
- FAIR metrics
- (CSS)
- (HTML)
- (JavaScript)