All software
CrowdED
CrowdED is a two-staged statistical guideline for optimal crowdsourcing experimental design in order to a-priori estimate optimal workers and tasks' assignment to obtain maximum accuracy on all tasks.
- Citizen Science
- Crowdsourcing
- Data Simulation
- Python
- R
- Dockerfile
cvasl
This library allows exploration and analyses of neuroimaging datsets. The software was developed to allow implementation of multiple large data harmonization and machine learning algorithms over neuroradiology datasets. The core algorithms are implemented in Python.
- Jupyter Notebook
- Python
- R
- + 3
cwltool
The reference implementation of the Common Workflow Language standards
- CommonWL
- CWL
- SciWorkflows
- Python
- Common Workflow Language
- Shell
- + 4
eEcology-SMS-reciever
If you have birds flying around carrying UvA-BiTS trackers, then this software can save the SMS messages containing the bird's last known positions which are sent by the tracker to the UvA Bird tracking system's central database.
- Real time data analysis
- Python
- Perl
- Mako
- + 1
eitprocessing
eitprocessing is an open source collaborative python library for the processing and analysis of electrical impedance tomography for clinical use.
- Electrical impedance tomography
- Image processing
- python
- Jupyter Notebook
- Python
- Dockerfile
ewatercycle-wflowjl
Wflow.jl plugin for eWatercycle.
- Python
- Dockerfile
Forecasting the grid emission factor for the Netherlands
A workflow to produce emission factor forecasts for the electricity mix of the Netherlands, up to 7 days ahead.
- electricity grid
- emission factor
- Forecasting
- + 1
- Python
- Dockerfile
GridFormat
Header-only C++ Library for grid file I/O
- Grid-based PDE methods
- grid file I/O
- mesh file I/O
- + 3
- C++
- CMake
- Python
- + 1
grpc4bmi
Run, read and write model state of a numerical simulation written in a variety of languages remotely from Python
- Multi-scale & multi model simulations
- Python
- C++
- Dockerfile
- + 5
iBridges
A wrapper around the python-irodsclient to allow for easy interaction with iRODS servers for research software engineers to integrate compute wokflows and data management.
- Data management
- iRODS
- Metadata Management
- + 1
- Python
- Jupyter Notebook
- Dockerfile
- + 2
kunefe
A Python package that helps users run containerized applications on HPC systems
- Agent-based modeling
- Apptainer
- containers
- + 5
- Python
- Shell
- Dockerfile
Laserfarm
Laserfarm: Laserchicken Framework for Applications in Research in Macroecology. Leverage Laserchicken in distributed fashion to use continental scale point cloud datasets for research.
- Python
- Jupyter Notebook
- Dockerfile