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Springtime

Spatiotemporal phenology research with interpretable models

geospatial
Machine learning
phenology

Python
Dockerfile

STEMMUS_SCOPE

Integrated code of SCOPE and STEMMUS

Jupyter Notebook
MATLAB
Python
+ 2

Streetview Segmentation

Perform semantic segmentation on images, using Facebook's Mask2Former models.

docker
image recognition
Machine learning
+ 2

Python
Dockerfile

Structure from Motion

Construct 3D pointclouds from a set of 2D images

Python
Shell
MATLAB
+ 2

Turing Data Safe Haven

Data Safe Haven is an open-source framework for creating Trusted Research Environments (TREs) to analyse sensitive data. It provides a set of scripts that will allow you to deploy, administer and use your own TRE on Microsoft Azure cloud.

Cloud
cloud storage
Infrastructure as code
+ 3

Python
Shell
R
+ 2

Umple

Umple allows generation of code in Java, PHP and other languages from a textual representation of UML state machines, associations and other modeling constructs, thus saving coding effort

Code Generation
Software Modeling
State Machines
+ 1

Java
JavaScript
GAP
+ 17

Vantage6

An open-source platform for supporting the development of federated learning projects

federated learning
healthcare
privacy preserving analysis
+ 1

Python
TypeScript
HTML
+ 6

Virus Seq

The VirusSeq Data Portal is an open-source and open-access data portal for all Canadian SARS-CoV-2 sequences and associated non-personal contextual data. It harmonizes, validates and automates submission to international databases.

COVID-19
Data portal
genomics
+ 1

TypeScript
JavaScript
HTML
+ 2

Xenon command line interface

A command line interface for the Xenon library that allows you to use remote machines to do your computations.

High performance computing

Java
Common Workflow Language
Dockerfile
+ 2

Xenon Docker images

For your testing needs a collection of Docker images with different file systems and batch schedulers.

High performance computing
Workflow technologies

Shell
Dockerfile
Roff
+ 4

Yoda

A system for reliable, long-term storing and archiving large amounts of research data during all stages of a study.

HTML
Jinja
Python
+ 5