All software
Xenon command line interface
A command line interface for the Xenon library that allows you to use remote machines to do your computations.
- High performance computing
- Java
- Common Workflow Language
- Dockerfile
- + 2
nlppln
A flexible solution to build text mining workflows that allows you to quickly combine Natural Language Processing tools from different sources.
- Text analysis & natural language processing
- Python
- Common Workflow Language
- Dockerfile
adhtools
Use adhtools for analyzing Arabic corpora.
- Text analysis & natural language processing
- Visualization
- Workflow technologies
- Jupyter Notebook
- Python
- Common Workflow Language
- + 1
fairworkflows
A python library for constructing, annotating and publishing scientific workflows described using semantic technologies.
- Python
- HTML
- Common Workflow Language
- + 1
ochre
A tool to clean up text generated by OCR using individual words as well as their context.
- Machine learning
- Text analysis & natural language processing
- Common Workflow Language
- Jupyter Notebook
- Python
- + 2
Emo-spectre
Interactive visualization and exploration of multi modal time-series data and video
- Visualization
- Workflow technologies
- PLpgSQL
- Vue
- JavaScript
- + 5
scriptcwl
Create CWL workflows by writing a simple Python script.
- CWL
- Workflow technologies
- Python
- Common Workflow Language
Cerise
Cerise is a service for running CWL workflows on HPC resources. You add software, tool descriptions, and connection information, then your user runs workflows whenever they want.
- High performance computing
- Optimized data handling
- Workflow technologies
- Python
- Common Workflow Language
- Dockerfile
- + 2
ClinDIG
ClinDIG provides a federated data management and analysis solution for clinical and genomic data while to provide opportunity for distributed analysis centred on protecting patient privacy.
- clinical
- federated
- genomics
- + 1
- Python
- Shell
- Smarty
- + 5
cwltool
The reference implementation of the Common Workflow Language standards
- CommonWL
- CWL
- SciWorkflows
- Python
- Common Workflow Language
- Shell
- + 4
One button compute
Web application for running a CWL workflow on a bunch of files.
- Optimized data handling
- Workflow technologies
- Python
- HTML
- Common Workflow Language