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Highly portable parallel workflow to detect structural variants in cancer genomes.
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Xenon command line interface
A command line interface for the Xenon library that allows you to use remote machines to do your computations.
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Description
- Provides an easy-to-use command line interface for distributed computing developers
- Makes the main methods of the Xenon library accessible on the command line
- Low threshold introduction to the features of Xenon library
- No programming required to use
- Used in training material of Xenon library
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Mentions
Portable HPC workflows with Snakemake, Conda, and Xenon
Author(s): Jurriaan H. Spaaks
Published in 2018
- 1.Author(s): Jason Maassen, Stefan Verhoeven, Joris Borgdorff, Niels Drost, Jurriaan H. Spaaks, Christiaan Meijer, Rob V. Van Nieuwpoort, Atze Van Der Ploeg, Piter T. De Boer, Ben Van WerkhovenPublished by Zenodo in 201710.5281/zenodo.1040261
- 2.Author(s): Jason Maassen, Stefan Verhoeven, Joris Borgdorff, Niels Drost, Christiaan Meijer, Jurriaan H. Spaaks, Rob V. Van Nieuwpoort, Piter T. De Boer, Ben Van WerkhovenPublished by Zenodo in 201710.5281/zenodo.838984
- 3.Author(s): Jason Maassen, Stefan Verhoeven, Joris Borgdorff, Niels Drost, Jurriaan H. Spaaks, Christiaan Meijer, Rob V. Van Nieuwpoort, Atze Van Der Ploeg, Piter T. De Boer, Ben Van WerkhovenPublished by Zenodo in 201710.5281/zenodo.1042443
- 4.Author(s): Jason Maassen, Stefan Verhoeven, Joris Borgdorff, Niels Drost, Jurriaan H. Spaaks, Christiaan Meijer, Rob V. Van Nieuwpoort, Atze Van Der Ploeg, Piter T. De Boer, Ben Van WerkhovenPublished by Zenodo in 201710.5281/zenodo.1036769
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Jurriaan H. Spaaks
Netherlands eScience Center
Netherlands eScience Center
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If you are using remote machines to do your computations, and don’t feel like learning and implementing many different APIs, Xenon is the tool for you.
Updated 24 months ago
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