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Cover image for 3D Slicer

3D Slicer

3D Slicer is a free, open source software for visualization, processing, segmentation, registration, and analysis of medical, biomedical, and other 3D images and meshes; and planning and navigating image-guided procedures.

  • 3D
  • 3DSlicer
  • Extension
  • + 7
  • C++
  • Python
  • CMake
  • + 5
4
5
Cover image for AMBER

AMBER

A real-time pipeline to search for Fast Radio Bursts and other transient radio sources.

  • Big data
  • GPU
  • High performance computing
  • + 1
  • C++
  • CMake
3
12
Cover image for AMUSE

AMUSE

Combine existing numerical codes in an easy to use Python framework. With AMUSE you can simulate objects such as star clusters, proto-planetary disks and galaxies.

  • High performance computing
  • Multi-scale & multi model simulations
  • Workflow technologies
  • AMPL
  • C
  • Fortran
  • + 25
6
6
Cover image for COMPAS Toolkit

COMPAS Toolkit

The Compas Toolkit is a high-performance C++ library offering GPU-accelerated functions for use in quantitative MRI research.

  • GPU
  • High performance computing
  • MRI
  • Cuda
  • C++
  • Julia
  • + 3
3
0
Cover image for cudawrappers

cudawrappers

The cudawrappers library is a C++ wrapper for the Nvidia C libraries such as the CUDA driver, NVRTC, and cuFFT.

  • accelerators
  • CUDA
  • GPU
  • C++
  • CMake
  • Python
  • + 1
12
0
Cover image for DALES

DALES

DALES is a large-eddy simulation code designed for studies of the physics of the atmospheric boundary layer, including convective and stable boundary layers as well as cloudy boundary layers.

  • Fortran
  • C
  • TeX
  • + 8
24
11
Cover image for DuMux

DuMux

DuMux is short for "DUNE for Multi-{Phase, Component, Scale, Physics, …} flow and transport in porous media". It is an open-source simulator and research code in modern C++. It provides a framework for the implementation and application of porous media model concepts and constitutive relations.

  • porous media
  • Simulation
  • C++
  • CMake
  • Python
  • + 2
1
0
Cover image for Eigencuda

Eigencuda

Offload Eigen matrix-matrix multiplications to an Nvidia GPU

  • GPU
  • High performance computing
  • C++
  • CMake
2
0
Cover image for FastMLC

FastMLC

Detect clusters in for example large collections of DNA or protein sequences, and visualize the results in a web browser.

  • Big data
  • Machine learning
  • Visualization
  • C++
  • C
  • Makefile
  • + 5
5
2
Cover image for Davidson diagonalization in Fortran

Davidson diagonalization in Fortran

This package contains a Modern Fortran implementation of the Davidson diagonalization algorithms to compute several eigenvalue-eigenvector pairs of a symmetric matrix

  • High performance computing
  • Fortran
  • CMake
  • Python
3
0
Cover image for grpc4bmi

grpc4bmi

Run, read and write model state of a numerical simulation written in a variety of languages remotely from Python

  • Multi-scale & multi model simulations
  • Python
  • C++
  • Dockerfile
  • + 5
3
0
Cover image for HPGEM

HPGEM

hpGEM is a C++ partial differential equation solver. It is intended for Discontinuous Galerkin Finite Element Methods, but can also do normal (conforming) Finite Element Methods and Finite Volume.

  • Finite Element
  • High performance computing
  • C++
  • CMake
  • TeX
  • + 6
4
0