All software
NeuroGym
NeuroGym is a curated collection of neuroscience tasks with a common interface. The goal is to facilitate the training of neural network models on neuroscience tasks.
- deep learning
- Machine learning
- Neuroscience
- + 3
- (Python)
NPLinker eScience Workshop GenMetMine Materials
These materials were used as a part of the NPLinker eScience Workshop on Natural Product Genome & Metabolome Mining: https://www.wur.nl/en/research-results/chair-groups/plant-sciences/bioinformatics/teaching/nplinker_workshop.htm Most materials are available in a format facilitating its reuse.
- Data mining
- genomics
- Inter-operability & linked data
- + 4
Nunaliit
The Nunaliit Atlas Framework aims to make it easy to tell stories and highlight relationships between many different forms of information from a variety of sources, using maps as a central way to connect and interact with the data.
- atlas
- cartography
- database
- + 6
- (C)
- (CSS)
- ("Go Template")
- + 10
OBiBa Agate
Agate is a web application that offers users related services to the OBiBa software stack.
- authentication
- Epidemiology
- (Batchfile)
- (FreeMarker)
- (HTML)
- + 7
OBiBa Mica
Mica is OBiBa's software application that is used to create data web portals for large-scale epidemiological studies or multiple-study consortia.
- euCanSHare, software integration
- (Batchfile)
- (CSS)
- (FreeMarker)
- + 6
OBiBa Opal
Opal is OBiBa's core data repository application for epidemiological studies.
- euCanSHare, software integration
- (ANTLR)
- (Batchfile)
- (HTML)
- + 8
Ocean Networks Canada
By bringing data to the surface, ONC provides ocean intelligence to scientists, governments, organizations, and citizens. Ocean data are archived, processed and made freely available via ONC’s data management system, Oceans 3.0.
OCTSEG
Analyze retinal optical coherence tomography images.
- Image processing
- (M)
- (MATLAB)
One button compute
Web application for running a CWL workflow on a bunch of files.
- Optimized data handling
- Workflow technologies
- ("Common Workflow Language")
- (HTML)
- (Python)
OpenDA
Open data assimilation toolbox. OpenDA is an open interface standard for a set of tools to quickly implement data-assimilation and calibration for arbitrary numerical models.
- Optimized data handling
- (Batchfile)
- (Brainfuck)
- (C)
- + 23
Open Matrices Stimulus Set (omss)
omss is a Python package for generating matrix reasoning puzzles, inspired by Raven's Progressive Matrices. It allows users to generate an unlimited number of customizable puzzles across a range of difficulty levels by setting rules for visual elements.
- Intelligence
- Matrices
- python
- + 1
- (Python)
OpenRefine
OpenRefine is a powerful free, open source tool for working with messy data: cleaning it; transforming it from one format into another; and extending it with web services and external data.
- Data Analysis
- Data Science
- (Batchfile)
- (CSS)
- (HTML)
- + 8