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73-84 of 518

laserchicken

Toolkit for preprocessing and feature calculation of point clouds created using airborne laser scanning

Big data
Machine learning

Python
Jupyter Notebook

MUSCLE3

MUSCLE3 is a coupling library for building multiscale simulations out of single-scale models.

High performance computing
Multi-scale & multi model simulations

Fortran
C++
Python
+ 4

swyft

swyft is the official implementation of Truncated Marginal Neural Ratio Estimation, a hyper-efficient, simulation-based inference technique for complex data and expensive simulators.

Bayesian Inference
Data Analysis

Jupyter Notebook
Python

talkr

{talkr} is an R package that offers a set of convenience functions for quality control, visualisation and analysis of conversational data. Most notably it provides a range of plotting functions that play well with ggplot and the tidyverse.

conversation
talk
turn-taking
+ 1

Citation File Format

The Citation File Format lets you provide citation metadata for software or datasets in plaintext files that are easy to read by both humans and machines.

FAIR
Inter-operability & linked data

Python

DIANNA

Deep Insight And Neural Network Analysis, DIANNA is the only Explainable AI, XAI library for scientists supporting Open Neural Network Exchange, ONNX - the de facto standard models format.

Explainable AI
Image processing
Machine learning
+ 2

Jupyter Notebook
Python
TeX

Inseq

Interpretability for sequence generation models 🐛 🔍

deep learning
Explainable AI
generative models
+ 2

Python
Makefile
Dockerfile

QTLTableMiner++

Extract gene-trait associations from scientific literature

Inter-operability & linked data
Text analysis & natural language processing

Java
Shell

BIAS

A toolbox for detecting structural bias in continuous optimization heuristics.

Bias
Metaheuristics
optimization
+ 1

Jupyter Notebook
Python
R

Arena-Crowds

Arena-Crowds is Python scripts for the data analysis to estimate crowd density based on WiFi positioning.

Computer networks
Networks
Network Science

Jupyter Notebook
Python

DeepRank2

DeepRank2 is an open-source deep learning framework for data mining of protein-protein interfaces or single-residue missense variants. This package is an improved and unified version of three previously developed packages: DeepRank, DeepRank-GNN and DeepRank-Mut.

Cancer vaccine
Convolutional Neural Network
Deep Learning Framework
+ 5

Python
Jupyter Notebook
TeX
+ 1

StoryTeller

StoryTeller is a web application for visual analysis of textual data which can show you the connections between storylines, participants and other entities in complex humanities data.

Visualization

JavaScript
HTML
CSS