Software | Research Software Directory

DUECA/DUSIME Middleware for Implementing Distributed Real-Time Simulations

Middleware framework
publish-subscribe communication
real-time simulation

4

48

fsbrain

The fsbrain package provides visualization of neuroimaging data in R. The plots produced by fsbrain can be integrated into R notebooks or written to high-quality bitmap image files, ready for publication.

Computational Neuroscience
Visualization

(Dockerfile)
(R)
(Shell)

1

48

Netherlands eScience Center Python Template

Generic template for Python packages, so you can spend less time setting up and configuring, and comply with the Netherlands eScience Center Software Development Guide from the start.

software development tools
software sustainability
template

(Jinja)
(Python)
(Shell)

23

48

Via Appia Visualization

A web application which visualizes the point clouds and additional data gathered in the Via Appia project with WebGL.

Visualization

(CSS)
(HTML)
(JavaScript)

8

48

[MegAWES] Matlab/Simulink model underlying the publication: Six Degrees-of-Freedom Simulation Model for Multi-Megawatt Airborne Wind Energy Systems

6 DoF rigid-body kite
Airborne Wind Energy (AWE)
Airborne wind energy power performance
+ 3

1

46

Code underlying the publication: Integrity-based Explanations for Fostering Appropriate Trust in AI Agents

AI agent
appropriate trust
explanations
+ 1

4

43

3D-e-Chem Virtual Machine

A freely available Virtual Machine encompassing tools, databases, and workflows for cheminformaticians, including new resources developed for ligand binding site comparisons and GPCR research.

Inter-operability & linked data
Workflow technologies

(Shell)
(Smarty)

2

42

CODaN

CODaN: Common Objects Day and Night, an image classification dataset.

color invariants
computer vision
day-night
+ 2

(Markdown)
(Other)
(Python)

4

42

Code underlying the publication: Zero-Shot Day-Night Domain Adaptation with a Physics Prior

color invariant convolution
color invariants
data efficient deep learning

(Markdown)
(Other)
(Python)

4

42

MATLAB model of multiscale model for CO2 electrolysis

CO2 electrolysis
Multiscale model
Techno-economic analysis

5

42

compareMS2

compareMS2 is a tool for direct comparison of tandem mass spectrometry (MS/MS) datasets, typically from LC-MS/MS, in proteomics or metabolomics, defining a distance as a function of the share of similar spectra. Applications span biomedicine, phylogenetics, forensics, ecology and food science.

Ecology
Food Science
Forensics
+ 4

(CSS)
(Go)
(HTML)
+ 2

4

42

KLIFS KNIME nodes

If you are working in the KNIME worflow platform and need data about your favorite kinase receptor ligand interaction, then these nodes are for you.

Workflow technologies

(Java)
(Scala)
(Shell)

2

42