All software
cwltool
The reference implementation of the Common Workflow Language standards
- CommonWL
- CWL
- SciWorkflows
- Python
- Common Workflow Language
- Shell
- + 4
eEcology-SMS-reciever
If you have birds flying around carrying UvA-BiTS trackers, then this software can save the SMS messages containing the bird's last known positions which are sent by the tracker to the UvA Bird tracking system's central database.
- Real time data analysis
- Python
- Perl
- Mako
- + 1
eitprocessing
eitprocessing is an open source collaborative python library for the processing and analysis of electrical impedance tomography for clinical use.
- Electrical impedance tomography
- Image processing
- python
- Jupyter Notebook
- Python
- Dockerfile
ewatercycle-wflowjl
Wflow.jl plugin for eWatercycle.
- Python
- Dockerfile
Forecasting the grid emission factor for the Netherlands
A workflow to produce emission factor forecasts for the electricity mix of the Netherlands, up to 7 days ahead.
- electricity grid
- emission factor
- Forecasting
- + 1
- Python
- Dockerfile
GridFormat
Header-only C++ Library for grid file I/O
- Grid-based PDE methods
- grid file I/O
- mesh file I/O
- + 3
- C++
- CMake
- Python
- + 1
grpc4bmi
Run, read and write model state of a numerical simulation written in a variety of languages remotely from Python
- Multi-scale & multi model simulations
- Python
- C++
- Dockerfile
- + 5
iBridges
A wrapper around the python-irodsclient to allow for easy interaction with iRODS servers for research software engineers to integrate compute wokflows and data management.
- Data management
- iRODS
- Metadata Management
- + 1
- Python
- Jupyter Notebook
- Dockerfile
- + 2
kunefe
A Python package that helps users run containerized applications on HPC systems
- Agent-based modeling
- Apptainer
- containers
- + 5
- Python
- Shell
- Dockerfile
Laserfarm
Laserfarm: Laserchicken Framework for Applications in Research in Macroecology. Leverage Laserchicken in distributed fashion to use continental scale point cloud datasets for research.
- Python
- Jupyter Notebook
- Dockerfile
leakybucket
A Python BMI leaky bucket model 🪣
- Jupyter Notebook
- Python
- Dockerfile
Lokum
Deploy GlusterFS, Docker, Spark and JupyterHub services on bare-metal cluster.
- Big data
- High performance computing
- Optimized data handling
- Python
- HCL
- Shell
- + 2