Software | Research Software Directory

Twiqs

Software behind the web server twiqs.nl, which has provided free access to statistics about Dutch tweets since 2010

Big data
Text analysis & natural language processing
Visualization

HTML
Java
JavaScript
+ 3

1

75

MPI.jl

MPI wrappers for Julia

HPC
Julia Package
MPI

Julia
Python
Shell

4

74

Gaussian FLORIDyn, Matlab implementation belonging to the paper: The revised FLORIDyn model: Implementation of heterogeneous flow and the Gaussian wake

FLOw Redirection and Induction Dynamics (FLORIDyn)
systems and control theory
wind currents
+ 1

1

73

NPLinker Web Application

This is the NPLinker web application, developed with Plotly Dash. It enables interactive visualization of NPLinker predictions and is designed to be run locally or in a containerized environment.

Data mining
Genome
Metabolome
+ 2

CSS
Dockerfile
Mustache
+ 1

13

73

powerfit

Rigid body fitting of atomic strucures in cryo-electron microscopy density maps

cryo-electron microscopy
macromolecular structure
map fitting

C
Cuda
Dockerfile
+ 3

6

72

dtscalibration

A Python package to load raw Distributed Temperature Sensing (DTS) files, perform a calibration, and plot the result.

calibration
DTS
fiber optic
+ 1

Jupyter Notebook
Python

2

71

Code to paper: Review of image segmentation techniques for the layup defect detection in the Automated Fiber Placement process

dlr
fiber placement
inspection

2

70

PanTools

PanTools is a pangenomic toolkit for comparative analysis of large number of genomes. It is developed in the Bioinformatics Group of Wageningen University, the Netherlands. Please cite the relevant publication(s) from the list of publications if you use PanTools in your research.

Data Analysis
Gene classification
pangenomics

Java
Python
Roff Manpage
+ 1

3

70

KG-tool: Python package for accessing the Chemical Engineering Knowledge Graph (ChemEngKG)

Artificial Intelligence
chemical engineering
chemical process development
+ 2

4

67

QMflows

Construction and efficient execution of computational chemistry workflows.

Multi-scale & multi model simulations
Workflow technologies

Jupyter Notebook
Python
Shell

3

64

Vantage6

An open-source platform for supporting the development of federated learning projects

federated learning
healthcare
privacy preserving analysis
+ 1

Dockerfile
Go Template
HTML
+ 7

11

64

GSA report

GSAreport is an application to easily generate reports that describe the global sensitivities of your input parameters as best as possible. You can use the reporting application to inspect which features are important for a given real world function / simulator or model.

Explainable AI
Machine learning
python
+ 1

CSS
HTML
Jupyter Notebook
+ 1

2

63