All software
Netherlands eScience Center Python Template
Generic template for Python packages, so you can spend less time setting up and configuring, and comply with the Netherlands eScience Center Software Development Guide from the start.
- software development tools
- software sustainability
- template
- Jinja
- Python
- Shell
DUECA/DUSIME Middleware for Implementing Distributed Real-Time Simulations
DUECA/DUSIME Middleware for Implementing Distributed Real-Time Simulations
- Middleware framework
- publish-subscribe communication
- real-time simulation
open-DARTS
Open Delft Advanced Research Terra Simulator is a simulation framework for forward and inverse modelling and uncertainty quantification of multi-physics (thermo-hydro-mechanical-chemical) processes in geo-engineering applications as geothermal, CO2 sequestration, water pumping, and hydrogen storage.
- energy transition
- environmental modelling
- geothermal
- + 3
- Python
- C++
- Cuda
- + 2
Via Appia Visualization
A web application which visualizes the point clouds and additional data gathered in the Via Appia project with WebGL.
- Visualization
- JavaScript
- HTML
- CSS
KG-tool: Python package for accessing the Chemical Engineering Knowledge Graph (ChemEngKG)
KG-tool: Python package for accessing the Chemical Engineering Knowledge Graph (ChemEngKG)
- Artificial intelligence
- chemical engineering
- chemical process development
- + 2
hyphe
A research-driven web-crawler aimed at building, curating and categorizing a corpus of web actors and the network graph of hyperlinks connecting them.
- crawling
- Networks
- python
- + 1
- JavaScript
- Python
- HTML
- + 3
4CAT Capture & Analysis Toolkit
The 4CAT Capture and Analysis Toolkit provides modular data capture & analysis for a variety of social media platforms. Its goal is to make the capture and analysis of data from these platforms accessible to people through a web interface, without requiring any programming or web scraping skills.
- Big data
- python
- Social media
- + 1
- Python
- JavaScript
- HTML
- + 4
PanTools
PanTools is a pangenomic toolkit for comparative analysis of large number of genomes. It is developed in the Bioinformatics Group of Wageningen University, the Netherlands. Please cite the relevant publication(s) from the list of publications if you use PanTools in your research.
- Data Analysis
- Gene classification
- pangenomics
- Java
- Snakemake
- Python
- + 1
CODaN
CODaN: Common Objects Day and Night, an image classification dataset.
- color invariants
- computer vision
- day-night
- + 2
- Markdown
- Python
- Other
Code underlying the publication: Zero-Shot Day-Night Domain Adaptation with a Physics Prior
Code underlying the publication: Zero-Shot Day-Night Domain Adaptation with a Physics Prior
- color invariant convolution
- color invariants
- data efficient deep learning
- Python
- Markdown
- Other
compareMS2
compareMS2 is a tool for direct comparison of tandem mass spectrometry datasets, typically from liquid chromatography-tandem mass spectrometry (LC-MS/MS), defining a distance as a function of the share of similar spectra. Applications span biomedicine, phylogenetics, forensics and food science.
- Forensics
- mass spectrometry
- phylogenetics
- + 1
- JavaScript
- C
- HTML
- + 2
fsbrain
The fsbrain package provides visualization of neuroimaging data in R. The plots produced by fsbrain can be integrated into R notebooks or written to high-quality bitmap image files, ready for publication.
- Computational Neuroscience
- Visualization
- R
- Dockerfile
- Shell