All software
ReSurfEMG
ReSurfEMG is an open source collaborative python library for analysis of respiratory electromyography (EMG). The library includes functions for pre-processing, analysis and machine learning.
- electrophysiology
- EMG
- Machine learning
- + 1
- Batchfile
- Dockerfile
- Jupyter Notebook
- + 3
ROE
Designed for patient-specific prescription determination using personalized dose-response curves. Visualizes TCP and NTCP.
- Treatment Planning and dosimetry
- AGS Script
- Batchfile
- C
- + 20
ROOT
An open-source data analysis framework used by high energy physics and others.
- AppleScript
- Assembly
- Batchfile
- + 28
STIR
A software package for tomographic image reconstruction. Primarily used for PET and SPECT.
- Imaging and Image Processing
- Assembly
- Batchfile
- C
- + 10
TOPASopt
A toolkit for performing optimization with the TOPAS Monte Carlo simulation package. Includes tools for running simulations and analyzing results.
- Treatment Planning and dosimetry
- Batchfile
- Makefile
- PLSQL
- + 1
VU-Lab
This is the configuration and documentation page of the LARA lab automation setup at the VU. It incorporates SiLA servers for robotic arm, shakers and a microplate reader and runs the LARA lab automation framework for scheduling and orchestration.
- Dynamic scheduling
- laboratory automatization
- orchestration
- Batchfile
- Dockerfile
- Python
- + 1