All software
Vantage6
An open-source platform for supporting the development of federated learning projects
- federated learning
- healthcare
- privacy preserving analysis
- + 1
- Dockerfile
- Go Template
- HTML
- + 7
MPI.jl
MPI wrappers for Julia
- HPC
- Julia Package
- MPI
- Julia
- Shell
4CAT Capture & Analysis Toolkit
The 4CAT Capture and Analysis Toolkit provides modular data capture & analysis for a variety of social media platforms. Its goal is to make the capture and analysis of data from these platforms accessible to people through a web interface, without requiring any programming or web scraping skills.
- Big data
- python
- Social media
- + 1
- CSS
- Dockerfile
- HTML
- + 4
hyphe
A research-driven web-crawler aimed at building, curating and categorizing a corpus of web actors and the network graph of hyperlinks connecting them.
- crawling
- Networks
- python
- + 1
- CSS
- Dockerfile
- HTML
- + 3
fsbrain
The fsbrain package provides visualization of neuroimaging data in R. The plots produced by fsbrain can be integrated into R notebooks or written to high-quality bitmap image files, ready for publication.
- Computational Neuroscience
- Visualization
- Dockerfile
- R
- Shell
Netherlands eScience Center Python Template
Generic template for Python packages, so you can spend less time setting up and configuring, and comply with the Netherlands eScience Center Software Development Guide from the start.
- software development tools
- software sustainability
- template
- Jinja
- Python
- Shell
CorticalSim
Fast simulation of plant cortical microtubules.
- C
- C++
- Makefile
- + 3
compareMS2
compareMS2 is a tool for direct comparison of tandem mass spectrometry (MS/MS) datasets, typically from LC-MS/MS, in proteomics or metabolomics, defining a distance as a function of the share of similar spectra. Applications span biomedicine, phylogenetics, forensics, ecology and food science.
- Ecology
- Food Science
- Forensics
- + 4
- CSS
- Go
- HTML
- + 2
3D-e-Chem Virtual Machine
A freely available Virtual Machine encompassing tools, databases, and workflows for cheminformaticians, including new resources developed for ligand binding site comparisons and GPCR research.
- Inter-operability & linked data
- Workflow technologies
- Shell
- Smarty
KLIFS KNIME nodes
If you are working in the KNIME worflow platform and need data about your favorite kinase receptor ligand interaction, then these nodes are for you.
- Workflow technologies
- Java
- Scala
- Shell
Research Software Directory
A content management system for research software, which promotes the visibility, reuse, and impact of research software.
- FAIR
- Research Software Impact
- Software Citation
- CSS
- Dockerfile
- Go
- + 9
sv-callers
Highly portable parallel workflow to detect structural variants in cancer genomes.
- Big data
- High performance computing
- Workflow technologies
- Python
- Shell