All software
OpenMS
OpenMS is an open-source software C++ library for LC-MS data management and analyses. It offers an infrastructure for rapid development of mass spectrometry related software. OpenMS is free software available under the three clause BSD license and runs under Windows, macOS, and Linux.
- C++
- mass spectrometry
- metabolomics
- + 1
- C++
- MAXScript
- Cython
- + 15
OpenPNM
OpenPNM is an open source project aiming to provide porous media researchers with a ready-made framework for performing a wide range of pore network simulations.
- Pore network modeling
- C++
- MAXScript
- Cython
- + 15
Artifact of Knor: reactive synthesis using Oink
Artifact of Knor: reactive synthesis using Oink
- binary decision diagrams
- parity games
- reactive synthesis
- Other
- C
- HTML
- + 15
Code underlying the publication: Simulating event based pesticide transport with runoff and erosion, OpenLISEM-pesticide v.1
Code underlying the publication: Simulating event based pesticide transport with runoff and erosion, OpenLISEM-pesticide v.1
- environmental fate
- erosion
- modelling
- + 3
- Other
- R
- Markdown
- + 1
course-introduction-map
Interactive map for engaged learning for large soil and landscape-related courses.
- Education
- introduction lecture
- landscape
- + 1
- Other
- R
- Markdown
- + 1
IntervalMDPAbstractions.jl_ReproducibilityPackage
Data and code underlying the publication: Scalable control synthesis for stochastic systems via structural IMDP abstractions
- embedded systems
- Markov processes
- Stochastic control and optimization
- JSON
- C++
- HTML
- + 10
Research compendium for FAIR Sharing is Caring poster
Research compendium for FAIR Sharing is Caring poster
- Data Sharing
- FAIR data
- open science
- + 1
- Other
- HTML
- CSS
- + 4
Software supporting: RNA-Seq analysis of Brassicaceae species under different irradiances
Software supporting: RNA-Seq analysis of Brassicaceae species under different irradiances
- Brassicaceae
- Hirschfeldia incana
- photosynthesis
- + 1
- Python
- R
- Other
- + 1
TUD R Cafe Plot-a-thon: 4TU.RD stats
TUD R Cafe Plot-a-thon: 4TU.RD stats
- data visualization
- plot-a-thon
- Statistics
- Other
- JSON
- R
- + 2
admtools
Estimate age-depth models in geology and use them to transform various types of data (fossil ages, phylogenetic trees, trait evolution of lineages) between the time domain and the stratigraphic domain.
- Age-depth modeling
- Geochronology
- Sedimentology
- + 1
- R
asrlitcompare
A tool written in rmarkdown for assessing the level of agreement between two raters following screening in ASReview. Users only need the two .csv files downloaded from ASReview, and the tool will automatically compile a summary report as an HTML file, viewable in your web browser.
- ASReview
- inter-rater reliability
- literature screening
- + 1
- HTML
- C++
- JavaScript
- + 14
BridgeDbR
R package for the BridgeDb Java library making identifier mapping functionality available in the R environment.
- persistent identifiers
- Statistics
- R
- TeX
- HTML