All software
nanopub
The nanopub library provides a high-level, user-friendly python interface for searching, publishing and retracting nanopublications.
- Inter-operability & linked data
- JavaScript
- Python
- Shell
MDStudio
A tool to run molecular dynamics workflows.
- High performance computing
- Real time data analysis
- Workflow technologies
- CSS
- Dockerfile
- HTML
- + 5
Virtual Human Platform
The Virtual Human Platform (VHP) was developed through the VHP4Safety project to support chemical and pharmaceutical safety testing. VHP provides you with human-relevant tools and models for precision safety evaluation, helping you reduce reliance on laboratory animals.
- toxicology
- CSS
- Dockerfile
- HTML
- + 4
Software and data underlying the publication: Faithful Model Explanations through Energy-Constrained Conformal Counterfactuals
Software and data underlying the publication: Faithful Model Explanations through Energy-Constrained Conformal Counterfactuals
- Classification and Regression
- Deep Generative Models & Autoencoders
- Humanities & Computational Social Science
- + 1
- JavaScript
- JSON
- Julia
- + 6
PanVA
Variant Analysis within Pangenomes.
- API
- Data Analysis
- pangenomics
- CSS
- Dockerfile
- HTML
- + 6
group-trip-planning
Code underlying the publication: When in Doubt! Understanding the Role of Task Characteristics on Peer Decision-Making with AI Assistance
- Empirical Studies
- Group Decision-Making
- Human-AI Decision-Making
- + 5
- CSS
- HTML
- JavaScript
- + 4
Result Assessment Tool (RAT)
The Result Assessment Tool (RAT) is a free, open-source research toolbox for collecting, analyzing, and evaluating search results.
- computer science
- Data Analysis
- Information Retrieval
- + 6
- CSS
- Go Template
- HTML
- + 4
SPOT
SPOT is an interactive visualization tool for multi-dimensional data. It allows quick analysis of complex datasets and easy identification of correlations between variables.
- Big data
- Visualization
- CSS
- Dockerfile
- JavaScript
- + 2
eEcology Annotation Tool
Visualize and annotate GPS measurements of bird movements.
- Inter-operability & linked data
- Visualization
- API Blueprint
- CSS
- Dockerfile
- + 5
3D Slicer
3D Slicer is a free, open source software for visualization, processing, segmentation, registration, and analysis of medical, biomedical, and other 3D images and meshes; and planning and navigating image-guided procedures.
- 3D
- 3DSlicer
- Extension
- + 7
- C
- C++
- CMake
- + 6
eEecology Classification
Automatic classification of accelerometer data using a supervised learning approach.
- Machine learning
- Batchfile
- CSS
- HTML
- + 3
PerfectFit
This is a virtual coach system that coaches users into being more physically active and stop smoking.
- Big data
- health
- Gherkin
- JavaScript
- Shell