Skip to main content
Ctrl K

All software

160 software items. Page 3 of 14. 12 items per page. 1 filters active.
25-36 of 160

MUSCLE3

MUSCLE3 is a coupling library for building multiscale simulations out of single-scale models.

  • High performance computing
  • Multi-scale & multi model simulations
  • C
  • C++
  • Dockerfile
  • + 4
4
30

DeepRank2

DeepRank2 is an open-source deep learning framework for data mining of protein-protein interfaces or single-residue missense variants. This package is an improved and unified version of three previously developed packages: DeepRank, DeepRank-GNN and DeepRank-Mut.

  • Cancer vaccine
  • Convolutional Neural Network
  • Deep Learning Framework
  • + 5
  • Dockerfile
  • Jupyter Notebook
  • Python
  • + 1
12
26

Climate Rapid Evaluation Framework

Rapid Evaluation Framework for climate simulations

  • Big data
  • Climate modeling
  • CSS
  • Dockerfile
  • Go Template
  • + 6
12
23

MapReader

MapReader is an end-to-end computer vision (CV) pipeline for exploring and analyzing images at scale.

  • computer vision
  • digital humanities
  • geospatial
  • + 4
  • Dockerfile
  • Python
  • Shell
  • + 1
7
23

pbg-ld

Access integrated data on genes and associated traits in plants

  • Data Analysis
  • genomics
  • Inter-operability & linked data
  • Dockerfile
  • Makefile
  • PLpgSQL
  • + 2
4
16

PanVA

Variant Analysis within Pangenomes.

  • API
  • Data Analysis
  • pangenomics
  • CSS
  • Dockerfile
  • HTML
  • + 6
2
15

Virtual Human Platform

The Virtual Human Platform (VHP) was developed through the VHP4Safety project to support chemical and pharmaceutical safety testing. VHP provides you with human-relevant tools and models for precision safety evaluation, helping you reduce reliance on laboratory animals.

  • toxicology
  • CSS
  • Dockerfile
  • HTML
  • + 4
0
14

gammalearn

Deep Learning for Imaging Cherenkov Telescopes Data Analysis

  • cta
  • deep learning
  • Gamma-ray telescopes
  • + 1
  • Dockerfile
  • Python
4
13

Result Assessment Tool (RAT)

The Result Assessment Tool (RAT) is a free, open-source research toolbox for collecting, analyzing, and evaluating search results.

  • computer science
  • Data Analysis
  • Information Retrieval
  • + 6
  • CSS
  • Dockerfile
  • Go Template
  • + 6
5
13

Turing Data Safe Haven

Data Safe Haven is an open-source framework for creating Trusted Research Environments (TREs) to analyse sensitive data. It provides a set of scripts that will allow you to deploy, administer and use your own TRE on Microsoft Azure cloud.

  • Cloud
  • cloud storage
  • Infrastructure as code
  • + 3
  • Dockerfile
  • Jinja
  • PLpgSQL
  • + 4
29
13

MDStudio

A tool to run molecular dynamics workflows.

  • High performance computing
  • Real time data analysis
  • Workflow technologies
  • CSS
  • Dockerfile
  • HTML
  • + 5
4
10

Xenon command line interface

A command line interface for the Xenon library that allows you to use remote machines to do your computations.

  • High performance computing
  • Batchfile
  • Common Workflow Language
  • Dockerfile
  • + 2
2
9