All software
cvasl
This library allows exploration and analyses of neuroimaging datsets. The software was developed to allow implementation of multiple large data harmonization and machine learning algorithms over neuroradiology datasets. The core algorithms are implemented in Python.
- Jupyter Notebook
- Python
- R
- + 3
H-gear
This tool analyzes the transmission of political ideas during the American Revolution. It enables users to track shifts in concepts in letter correspondence networks, using semi-supervised topic modeling and temporal social network modeling to reveal ideological shifts and identify key influencers.
- American Revolution
- semi-supervised topic modeling
- social network analysis
- + 2
- R
- Python
- Batchfile
OBiBa Agate
Agate is a web application that offers users related services to the OBiBa software stack.
- authentication
- Epidemiology
- Java
- FreeMarker
- Vue
- + 7
OBiBa Mica
Mica is OBiBa's software application that is used to create data web portals for large-scale epidemiological studies or multiple-study consortia.
- euCanSHare, software integration
- Java
- JavaScript
- FreeMarker
- + 6
OBiBa Opal
Opal is OBiBa's core data repository application for epidemiological studies.
- euCanSHare, software integration
- Java
- Vue
- JavaScript
- + 8
OpenDA
Open data assimilation toolbox. OpenDA is an open interface standard for a set of tools to quickly implement data-assimilation and calibration for arbitrary numerical models.
- Optimized data handling
- Java
- Fortran
- Python
- + 22
OpenSim Creator
A UI for building OpenSim models
- biomechanical engineering
- opensim
- Simulation
- C++
- GLSL
- CMake
- + 5
Overture Song
Quickly and reliably track genome metadata scattered across multiple Cloud storage systems.
- Cancer Genomics
- Metadata Management
- Metadata Validation
- Java
- Python
- Shell
- + 7
PyXenon
Python wrapper for the Xenon programming interface to various compute and storage resources.
- Python
- Shell
- Batchfile
Remote BMI
Remote BMI allows you to communicate with Basic Model Interface enabled numerical models using a RESTful API
- Basic Model Interface
- BMI
- julia
- + 4
- Julia
- Python
- R
- + 3
ReSurfEMG
ReSurfEMG is an open source collaborative python library for analysis of respiratory electromyography (EMG). The library includes functions for pre-processing, analysis and machine learning.
- electrophysiology
- EMG
- Machine learning
- + 1
- Jupyter Notebook
- Python
- TeX
- + 3
ROOT
An open-source data analysis framework used by high energy physics and others.
- C++
- C
- JavaScript
- + 28