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13-24 of 36

byteparsing

Parser library for reading custom binary files from Python.

  • Big data
  • Multi-scale & multi model simulations
  • Optimized data handling
  • Jupyter Notebook
  • Python
  • C++
  • + 5
2
1

MMSODA Toolbox for MATLAB

MATLAB toolbox for global optimization and state estimation of dynamic models using distributed computing.

  • HTML
  • MATLAB
  • TeX
  • + 5
3
1
Logo for OpenMS

OpenMS

OpenMS is an open-source software C++ library for LC-MS data management and analyses. It offers an infrastructure for rapid development of mass spectrometry related software. OpenMS is free software available under the three clause BSD license and runs under Windows, macOS, and Linux.

  • C++
  • mass spectrometry
  • metabolomics
  • + 1
  • C++
  • MAXScript
  • Cython
  • + 15
27
1
Logo for OpenPNM

OpenPNM

OpenPNM is an open source project aiming to provide porous media researchers with a ready-made framework for performing a wide range of pore network simulations.

  • Pore network modeling
  • C++
  • MAXScript
  • Cython
  • + 15
5
1
Logo for PhenoTips

PhenoTips

PhenoTips is a software tool that makes it easy for clinicians and researchers to draw pedigrees and collect structured phenotype data for patients with genetic disorders.

  • API
  • deep phenotyping
  • genogram
  • + 6
  • Java
  • JavaScript
  • HTML
  • + 4
2
1
Logo for Plus Toolkit

Plus Toolkit

Toolkit for data acquisition, pre-processing, calibration, and real-time streaming of imaging, position tracking, and other sensor data for medical applications.

  • 3D Slicer
  • electromagnetic tracking
  • image capture
  • + 7
  • C++
  • C
  • CMake
  • + 2
4
1
Logo for PoreSpy

PoreSpy

PoreSpy is a collection of image analysis tools used to extract information from 3D images of porous materials (typically obtained from X-ray tomography).

  • image analysis
  • porous media
  • tomography
  • Python
  • C
  • Shell
  • + 2
2
1
Logo for SimVascular

SimVascular

The only fully open source software package providing a complete pipeline from medical image data segmentation to patient specific blood flow simulation and analysis.

  • Cardiovascular
  • Fluid mechanics
  • Medical image computing
  • + 1
  • C++
  • Makefile
  • Python
  • + 9
4
1
Logo for Umple

Umple

Umple allows generation of code in Java, PHP and other languages from a textual representation of UML state machines, associations and other modeling constructs, thus saving coding effort

  • Code Generation
  • Software Modeling
  • State Machines
  • + 1
  • Java
  • JavaScript
  • GAP
  • + 17
14
1

asrlitcompare

A tool written in rmarkdown for assessing the level of agreement between two raters following screening in ASReview. Users only need the two .csv files downloaded from ASReview, and the tool will automatically compile a summary report as an HTML file, viewable in your web browser.

  • ASReview
  • inter-rater reliability
  • literature screening
  • + 1
  • HTML
  • C++
  • JavaScript
  • + 14
2
0
Logo for Canadian Writing Research Collaboratory (CWRC)

Canadian Writing Research Collaboratory (CWRC)

CWRC aims to make digital research methods broadly accessible, and to develop an active community of researchers engaged in exploring the potential of collaboration online.

  • Canadian culture & history
  • cultural studies
  • digital humanities
  • + 1
  • JavaScript
  • PHP
  • HTML
  • + 16
1
0

CMLXOM

Java library for working with Chemical Markup Language files.

  • Chemical Markup Language
  • Chemistry
  • XML
  • Java
  • XSLT
  • HTML
  • + 1
2
0