All software
Source, documentation, tests: MACE: Automated Assessment of Stereochemistry of Transition Metal Complexes and its Applications in Computational Catalysis
Source, documentation, tests: MACE: Automated Assessment of Stereochemistry of Transition Metal Complexes and its Applications in Computational Catalysis
- automation
- chemoinformatics
- Computational Chemistry
- + 6
- Chemical XYZ
- Other
- Jupyter Notebook
- + 5
eEcology Annotation Tool
Visualize and annotate GPS measurements of bird movements.
- Inter-operability & linked data
- Visualization
- HTML
- Python
- Mako
- + 5
PSSMGen
Generates consistent PSSM and PDB files for protein-protein complexes
- Big data
- High performance computing
- Optimized data handling
- Python
- Makefile
PuReGoMe
Analyzes social media messages for polarity and stance towards governmental COVID-19 measures
- Machine learning
- Social media
- Jupyter Notebook
- Python
- Shell
rWikiPathways
Use this package to interface with the WikiPathways API. It provides programmatic access to WikiPathways content in multiple data and image formats, including official monthly release files and convenient GMT read/write functions.
- bioinformatics
- WikiPathways
- HTML
- R
- TeX
SPOT
SPOT is an interactive visualization tool for multi-dimensional data. It allows quick analysis of complex datasets and easy identification of correlations between variables.
- Big data
- Visualization
- JavaScript
- Pug
- Stylus
- + 2
Reference evapotranspiration (FAO-56)
Calculate a daily value of reference evapotranspiration, useful for vegetation (incl. crop) models. The module code is based on FAO-56 Penman-Monteith method.
3D Slicer
3D Slicer is a free, open source software for visualization, processing, segmentation, registration, and analysis of medical, biomedical, and other 3D images and meshes; and planning and navigating image-guided procedures.
- 3D
- 3DSlicer
- Extension
- + 7
- C++
- Python
- CMake
- + 5
Code supporting the paper: Sensitivity of a two-dimensional biomorphoelastic model for post-burn contraction
Code supporting the paper: Sensitivity of a two-dimensional biomorphoelastic model for post-burn contraction
- burn
- cell proliferation
- MATLAB
- + 4
Code supporting the paper: Stability of a one-dimensional morphoelastic model for post-burn contraction
Code supporting the paper: Stability of a one-dimensional morphoelastic model for post-burn contraction
- Burns
- MATLAB
- Morphoelasticity
- + 3
SBSL
Data and code underlying the publication: Overcoming Selection Bias in Synthetic Lethality Prediction
- anti-cancer therapeutics
- computational prediction
- gene dependency
- + 3
Software supporting the publication: Background Electromagnetic Noise Received via Ionospheric Propagation in a Remote Rural Location in Spain (set 1)
Software supporting the publication: Background Electromagnetic Noise Received via Ionospheric Propagation in a Remote Rural Location in Spain (set 1)
- ambient noise
- electromagnetic noise
- ionosphere
- + 3