All software
OBiBa Opal
Opal is OBiBa's core data repository application for epidemiological studies.
- euCanSHare, software integration
- ANTLR
- Batchfile
- HTML
- + 8
One button compute
Web application for running a CWL workflow on a bunch of files.
- Optimized data handling
- Workflow technologies
- Common Workflow Language
- HTML
- Python
OpenDA
Open data assimilation toolbox. OpenDA is an open interface standard for a set of tools to quickly implement data-assimilation and calibration for arbitrary numerical models.
- Optimized data handling
- Batchfile
- Brainfuck
- C
- + 23
OpenRefine
OpenRefine is a powerful free, open source tool for working with messy data: cleaning it; transforming it from one format into another; and extending it with web services and external data.
- Data Analysis
- Data Science
- Batchfile
- CSS
- HTML
- + 7
opynsim
Python-Native Musculoskeletal Modelling
- Batchfile
- BitBake
- C
- + 14
OsiriX
Widely used DICOM viewer. Supports 2D, 3D, 4D, 5D viewing.
- Imaging and Image Processing
- ActionScript
- AppleScript
- C
- + 12
oTree Demo Experiments
oTree demo experiment: Public goods game
- behavioral research
- oTree
- Workflow technologies
- HTML
- JavaScript
- Procfile
- + 1
oTree Waiting Room
A load balancer for oTree servers.
- oTree
- HTML
- JavaScript
- Shell
Overture Arranger
Data can be messy, let Arranger organize it for you.
- CSS
- HTML
- JavaScript
- + 3
parareal
This package runs the parareal algorithm on a black-box simulator. Parallelisation is managed through Dask.
- High performance computing
- Numerical analysis
- CSS
- Dhall
- HTML
- + 5
pdbwords
Render text as protein structures
- CSS
- HTML
- JavaScript
- + 2
Petri Nets on Hyperledger
Decentralized coordination of multi-domain workflows using Hyperledger Fabric blockchain and Petri nets.
- Blockchain
- hyperledger
- Petri net
- + 1
- CSS
- HTML
- JavaScript
- + 1