All software
MITK
Combines ITK and VTK with an application framework. Aims to reduce effort for interactive medical image analysis applications.
- Imaging and Image Processing
- Batchfile
- C
- C++
- + 8
mri_distortion_toolkit
A toolkit to correct geometric distortion in MR images. Includes tools for converting DICOM to NIfTI, and generating distortion correction maps.
- Imaging and Image Processing
- Batchfile
- CSS
- HTML
- + 3
Nunaliit
The Nunaliit Atlas Framework aims to make it easy to tell stories and highlight relationships between many different forms of information from a variety of sources, using maps as a central way to connect and interact with the data.
- atlas
- cartography
- database
- + 6
- C
- CSS
- Go Template
- + 10
OBiBa Agate
Agate is a web application that offers users related services to the OBiBa software stack.
- authentication
- Epidemiology
- Batchfile
- FreeMarker
- HTML
- + 7
OBiBa Mica
Mica is OBiBa's software application that is used to create data web portals for large-scale epidemiological studies or multiple-study consortia.
- euCanSHare, software integration
- Batchfile
- CSS
- FreeMarker
- + 7
OBiBa Opal
Opal is OBiBa's core data repository application for epidemiological studies.
- euCanSHare, software integration
- ANTLR
- Batchfile
- HTML
- + 8
One button compute
Web application for running a CWL workflow on a bunch of files.
- Optimized data handling
- Workflow technologies
- Common Workflow Language
- HTML
- Python
OpenDA
Open data assimilation toolbox. OpenDA is an open interface standard for a set of tools to quickly implement data-assimilation and calibration for arbitrary numerical models.
- Optimized data handling
- Batchfile
- Brainfuck
- C
- + 23
OpenRefine
OpenRefine is a powerful free, open source tool for working with messy data: cleaning it; transforming it from one format into another; and extending it with web services and external data.
- Data Analysis
- Data Science
- Batchfile
- CSS
- HTML
- + 7
opynsim
Python-Native Musculoskeletal Modelling
- Batchfile
- BitBake
- C
- + 14
OsiriX
Widely used DICOM viewer. Supports 2D, 3D, 4D, 5D viewing.
- Imaging and Image Processing
- ActionScript
- AppleScript
- C
- + 12
oTree Demo Experiments
oTree demo experiment: Public goods game
- behavioral research
- oTree
- Workflow technologies
- HTML
- JavaScript
- Procfile
- + 1