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381 software items. Page 13 of 32. 12 items per page. 1 filters active.
145-156 of 381

Plus Toolkit

Toolkit for data acquisition, pre-processing, calibration, and real-time streaming of imaging, position tracking, and other sensor data for medical applications.

  • 3D Slicer
  • electromagnetic tracking
  • image capture
  • + 7
  • Batchfile
  • C
  • C++
  • + 2
4
1

PoreSpy

PoreSpy is a collection of image analysis tools used to extract information from 3D images of porous materials (typically obtained from X-ray tomography).

  • image analysis
  • porous media
  • tomography
  • Batchfile
  • Python
  • Shell
2
1

qumia-train-scripts

Scripts and files related to ML training for the QUMIA project

  • Machine learning
  • Neuromuscular
  • ultrasound imaging
  • Jupyter Notebook
  • Python
  • Shell
3
1

self-hosted runners

Collection of resources to set up GitHub runners on self-hosted infrastructure

  • High performance computing
  • Dockerfile
  • Shell
5
1

SimVascular

The only fully open source software package providing a complete pipeline from medical image data segmentation to patient specific blood flow simulation and analysis.

  • Cardiovascular
  • Fluid mechanics
  • Medical image computing
  • + 1
  • Batchfile
  • C
  • C++
  • + 9
4
1

sirup

Sirup is an open-source Python package that makes it easy to connect to, and rotate across, VPN servers provided by services such as ProtonVPN and Surfshark.

  • ip-rotation
  • openvpn
  • python
  • + 1
  • Python
  • Shell
1
1

snakemake-wrf

A snakemake workflow to run WRF, including pre- and postprocessing. See our blog post for a detailed description.

  • geospatial
  • High performance computing
  • python
  • + 1
  • Jupyter Notebook
  • Python
  • Shell
2
1

Umple

Umple allows generation of code in Java, PHP and other languages from a textual representation of UML state machines, associations and other modeling constructs, thus saving coding effort

  • Code Generation
  • Software Modeling
  • State Machines
  • + 1
  • Batchfile
  • C++
  • CSS
  • + 18
14
1

WAM2layers

WAM2layers is an atmospheric moisture-tracking model that can be used to determine where precipitation originally evaporated (backtracking), or where evaporated moisture eventually ends up (forward tracking).

  • atmospheric rivers
  • ERA5
  • hydrological cycle
  • + 4
  • Jupyter Notebook
  • Python
  • Shell
4
1

WRF-runner

Simple shell script to run a complete WPS/WRF experiment in one go

  • climate
  • Forecasting
  • workflow
  • + 1
  • Shell
2
1

abstraction-mpc-integration

Code for publication: Temporal Logic Control of Nonlinear Stochastic Systems with Online Performance Optimization

  • Abstraction
  • formal methods
  • Hybrid Systems
  • + 3
  • CSS
  • HTML
  • JavaScript
  • + 4
5
0

AmpliDiff

Code underlying the publication: "AmpliDiff: An Optimized Amplicon Sequencing Approach to Estimating Lineage Abundances in Viral Metagenomes"

  • Abundance Estimation
  • Amplicon Sequencing
  • Primer Design
  • + 1
  • C
  • Markdown
  • Other
  • + 3
3
0