All software
SFINCS-BMI-server
grpc4bmi wrapper around Delteras/sfincs BMI for use with eWaterCycle
- C++
- CMake
- Dockerfile
- + 1
SigmaCV
Auto-generates clean, customizable academic CVs from open research data (OpenAlex, ORCID, Crossref, DataCite, Open Editors Plus) — free for individuals, open-source, FAIR by design.
- academic CV
- bibliometrics
- CSL
- + 6
- CSS
- Dockerfile
- JavaScript
- + 5
Smithsonian Voyager
Open source 3D explorer and authoring tool suite.
- CSS
- Dockerfile
- GLSL
- + 5
Springtime
Spatiotemporal phenology research with interpretable models
- geospatial
- Machine learning
- phenology
- Dockerfile
- Python
STEMMUS_SCOPE
Integrated code of SCOPE and STEMMUS
- Dockerfile
- Jupyter Notebook
- MATLAB
- + 2
Streetview Segmentation
Perform semantic segmentation on images, using Facebook's Mask2Former models.
- docker
- image recognition
- Machine learning
- + 2
- Dockerfile
- Python
Structure from Motion
Construct 3D pointclouds from a set of 2D images
- Dockerfile
- Java
- MATLAB
- + 2
SynBio Studio
Open-source (AGPL-3.0) IDE to design, simulate (deterministic and stochastic) and document genetic circuits.
- bioinformatics
- genetic circuit design
- genetic circuits
- + 6
- Batchfile
- CSS
- Dockerfile
- + 8
Tissue Simulation Toolkit
Tissue Simulation Toolkit (TST) 2.0 is an efficient C++ library for two-dimensional simulations of Glazier and Graner's Cellular Potts model (Glazier and Graner, 1993). It is suitable for simulations with live visualization as well as batch simulations on clusters.
- Cellular Potts Model
- Chemotaxis
- Embryology
- + 1
- C
- C++
- Cuda
- + 6
Unraphael
Unraphael is a computer vision tool for art history, designed to support the analysis of figure-outline similarities in images to study Renaissance copying practices. Its user-friendly interface lets researchers inspect structural patterns, revealing insights into artistic techniques.
- computational art analysis
- computer vision
- Image preprocessing
- + 3
- CSS
- Dockerfile
- Python
Verticox+
Verticox+ is a Cox proportional hazards algorithm for vertically distributed data. The solution is based on the Verticox algorithm from Dai et al., 2022. It has been adapted to be used within the Vantage6 framework.
- federated learning
- Java
- privacy preservation
- + 3
- Dockerfile
- Java
- Jinja
- + 4
Virus Seq
The VirusSeq Data Portal is an open-source and open-access data portal for all Canadian SARS-CoV-2 sequences and associated non-personal contextual data. It harmonizes, validates and automates submission to international databases.
- COVID-19
- Data portal
- genomics
- + 1
- CSS
- Dockerfile
- HTML
- + 2