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GitHub action to set up singularity

To use Singularity containers in a GitHub action workflow you need to install it first. This GitHub Action downloads, compiles and installs it for you.

TypeScript
Shell

grpc4bmi

Run, read and write model state of a numerical simulation written in a variety of languages remotely from Python

Multi-scale & multi model simulations

Python
C++
Dockerfile
+ 5

Hadrianus scripts

Scripts that transform cultural heritage relational databases into linked data by using cultural heritage ontologies.

Inter-operability & linked data

Shell
Perl
Python

HERA_CAL_QUANTUM

Radioastronomy calibration pipeline of the HERA telescope ported on quantum computers

Jupyter Notebook
Python
Shell

holodev

A command-line tool written in shell script to simplify the creation of LXC Linux containers.

Shell
Makefile

HORTON

HORTON is a Helpful Open-source Research Tool for N-fermion systems, written primarily in the Python programming language. The ultimate goal of HORTON is to provide a platform for testing new ideas on the quantum many-body problem at a reasonable computational cost.

electronic structure theory
quantum chemistry

Python
C++
Cython
+ 5

HPGEM

hpGEM is a C++ partial differential equation solver. It is intended for Discontinuous Galerkin Finite Element Methods, but can also do normal (conforming) Finite Element Methods and Finite Volume.

Finite Element
High performance computing

C++
CMake
TeX
+ 6

htr-quality-classifier

A package to determine the quality of a a digitized text, from a handwritten script or scanned print (HTR/OCR output).

Machine learning
python
Text analysis & natural language processing

Jupyter Notebook
Python
Shell

iBridges

A wrapper around the python-irodsclient to allow for easy interaction with iRODS servers for research software engineers to integrate compute wokflows and data management.

Data management
iRODS
Metadata Management
+ 1

Python
Jupyter Notebook
Dockerfile
+ 2

ICOS data repository

The ICOS Portal app is a FAIR linked data repository for metadata and data. In first instance primarily targeted at hosting the high quality data from ICOS. The repository is optimized for machine to machine communication. Instances in production now for ICOS, Swedish SITES and ICOS Cities networks.

Data
Inter-operability & linked data
metadata
+ 3

Scala
JavaScript
HTML
+ 3

imas2xarray

Imas2xarray is a python library for reading IMAS data in hdf5 format into xarray.

fusion-reactor
hdf5
python
+ 1

Jupyter Notebook
Python
Shell

Internet Archive scraper

The Internet Archive scraper is a workflow for collecting webpages archived in Internet Archive's Wayback Machine. It is designed to run serverless on Amazon's AWS infrastructure.

AWS
Internet Archive
python
+ 2

Python
HCL
Shell