All software
seahtrue
Seahtrue processes XF analyzer data on oxygen consumption and acidification from Agilent Wave .xlsx exports into tidy, nested tibbles, enabling reproducible analysis, preprocessing checks, advanced visualisation, and statistics for open metabolic research.
- bioconductor
- metabolism
- R
- + 2
- R
Sentinel
Sentinel is an automated log-file analysis application for Varian linacs (TrueBeam, Halcyon, Edge).
- Quality Assurance
- HTML
GitHub action to set up apptainer
GitHub action for setting up apptainer in a Continous Integration job
- High performance computing
- JavaScript
- Shell
- TypeScript
SFINCS-BMI-server
grpc4bmi wrapper around Delteras/sfincs BMI for use with eWaterCycle
- C++
- CMake
- Dockerfile
- + 1
ShareTrait website
Share Trait web application is a web application that allows users to deposit trait data in the Share Trait database.
- Data
- Inter-operability & linked data
- metadata
Sigma – Measurement Uncertainty Toolkit
Desktop application for measurement uncertainty analysis in accordance to JCGM 100:2008 and JCGM 101:2008 (GUM). Arbitrary measurement functions can be evaluated, and both independent and correlated input parameters are supported. Monte Carlo simulation is available for more complex models.
- calibration
- Measurement
- measurement uncertainties
- + 4
- C
- C++
- CMake
- + 2
SigmaCV
Auto-generates clean, customizable academic CVs from open research data (OpenAlex, ORCID, Crossref, DataCite, Open Editors Plus) — free for individuals, open-source, FAIR by design.
- academic CV
- bibliometrics
- CSL
- + 6
- CSS
- Dockerfile
- JavaScript
- + 5
SIRF
This software is the main output of SyneRBI, the Collaborative Computational Platform for Synergistic Reconstruction for Biomedical Imaging (formerly CCP PETMR).
- Imaging and Image Processing
- C
- C++
- CMake
- + 5
SkyCoords.jl
Astronomical coordinate systems in Julia
- astronomy
- Astrophysics
- Coordinate systems
- + 1
- Julia
SLURM CLI-API Proxy
SLURM CLI-API Proxy client is a tool designed to bridge existing applications and scripts that rely on the SLURM CLI. The tool mimics traditional SLURM CLI commands, translating them into REST API calls, enabling seamless integration of existing tools with external SLURM workload managers.
- Arvados
- Proxy
- SLURM
- Go
- Python
- Shell
slurm-mongo
A package to download slurm usage from a supercomputer and upload it to MongoDB
- Big data
- High performance computing
- SLURM
- Python
Slurm time on Jupyter
Display Slurm job remaining time in Jupyter top bar
- High performance computing
- jupyter notebooks
- SLURM
- CSS
- JavaScript
- Python
- + 1