All software
sv-gen
Highly portable parallel workflow to generate artificial genomes with structural variants.
- Big data
- High performance computing
- Workflow technologies
- (Python)
- (Shell)
Swan
Swan is a Python package to create statistical models to predict molecular properties
- Machine learning
- ("Jupyter Notebook")
- (Python)
TaxoTagger Webapp
Webapp for DNA barcode identification, powered by semantic searching.
- Fungi
- Machine learning
- semantic search
- + 3
- (Python)
Teachbook recombiner
Web app to pick chapters from a pre-defined list of TeachBooks and combine them into a new book using the new external table of content entry type
- (CSS)
- (HTML)
- (JavaScript)
- + 1
test-bitbucket
An entry for testing the connection with a BitBucket repo
the FAIR extension
A web browser extension to evaluate Digital Object FAIRness developed at Maastricht University Library.
- FAIR assessment
- FAIR Digital Objects
- FAIR metrics
- (CSS)
- (HTML)
- (JavaScript)
Tilbot
An open source, open science approach to the design of, and research with conversational agents.
- Text analysis & natural language processing
- (CSS)
- (HTML)
- (JavaScript)
- + 2
Tilburg University Coding Café
Materials for Tilburg University's Coding Café
- community
- learning materials
- presentation
- + 3
Tissue Simulation Toolkit
Tissue Simulation Toolkit (TST) 2.0 is an efficient C++ library for two-dimensional simulations of Glazier and Graner's Cellular Potts model (Glazier and Graner, 1993). It is suitable for simulations with live visualization as well as batch simulations on clusters.
- Cellular Potts Model
- Chemotaxis
- Embryology
- + 1
- (C)
- (C++)
- (Cuda)
- + 5
TOPAS
The TOPAS toolkit aims to provide an intuitive Monte Carlo framework for medical physicists and researchers in related fields
- Treatment Planning and dosimetry
- (C++)
- (CMake)
- (Python)
- + 1
TOPASopt
A toolkit for performing optimization with the TOPAS Monte Carlo simulation package. Includes tools for running simulations and analyzing results.
- Treatment Planning and dosimetry
- (Batchfile)
- (Makefile)
- (PLSQL)
- + 1
ToxTempAssistant
LLM-based web-app to assist users in drafting ToxTemp, a template for describing in-vitro toxicity test methods in compliance with GD211.
- metadata
- (Dockerfile)
- (HTML)
- (JavaScript)
- + 4