All software
Research Portal for Secure Data Discovery, Access, and Collaboration
A Research Portal that can address these different usage models, while serving as website and gateway for authorized researchers to capture, query, and visualize patient data; communicate, collaborate and share datasets; and access support and training resources. platforms.
- Collaboration
- Data Access Request
- Data Sharing
- + 3
RESTful APE
RESTful API for the APE (Automated Pipeline Explorer) library.
- Java
- Program synthesis
- REST API
- + 1
- (Dockerfile)
- (Java)
ReSurfEMG
ReSurfEMG is an open source collaborative python library for analysis of respiratory electromyography (EMG). The library includes functions for pre-processing, analysis and machine learning.
- electrophysiology
- EMG
- Machine learning
- + 1
- (Batchfile)
- (Dockerfile)
- ("Jupyter Notebook")
- + 3
ReSurfEMG-dashboard
A dashboard for visualizing and analyzing respiratory EMG signal, making use of the ReSurfEMG library
- EMG
- Time Series Analysis
- Visualization
- (Python)
RickView
Easy to deploy low-resource stand-alone RDF knowledge graph browser written in Rust. No SPARQL endpoint needed!
- Linked Data
- Linked Data Browser
- RDF
- + 2
- (CSS)
- (Dockerfile)
- (HTML)
- + 1
Rivet
Rivet is a toolkit for validation and analysis of Monte Carlo event generators in particle physics. It provides a library of reusable analysis components and a large collection of published analyses, enabling precise, reproducible comparisons between theory and experimental data.
- Big data
- Collider physics
- Data Analysis
- + 2
- (C)
- (C++)
- (Gnuplot)
- + 2
ROE
Designed for patient-specific prescription determination using personalized dose-response curves. Visualizes TCP and NTCP.
- Treatment Planning and dosimetry
- ("AGS Script")
- (Batchfile)
- (C)
- + 20
ROOT
An open-source data analysis framework used by high energy physics and others.
- (AppleScript)
- (Assembly)
- (Batchfile)
- + 28
Rosemary
Rosemary is a plugin for YASGUI (Yet Another SPARQL GUI), facilitating creation of SPARQL queries without requiring knowledge of SPARQL.
- Data
- database
- Data management
- + 10
- (CSS)
- (Dockerfile)
- (HTML)
- + 1
rspacer
rspacer is an R package that wraps the RSpace Electronic Lab Notebook (https://www.researchspace.com/) API. It provides convenience functions to browse, search, create, and edit your RSpace documents. In addition, it enables filling RSpace templates using R Markdown/Quarto reports or tabular data.
- Electronic Lab Notebook
- FAIR
- research data management
- + 1
- (HTML)
- (R)
RTEMIS
Advanced Machine Learning and Visualization
- Artificial Intelligence
- (Just)
- (R)
- (Shell)
RTpipeline
RTpipeline is a comprehensive, research-grade pipeline that transforms raw DICOM radiotherapy exports into analysis-ready data. It bridges the technical gap between clinical Treatment Planning Systems (TPS) and statistical/ML analysis
- Clinical workflow and applications
- (Dockerfile)
- (HTML)
- ("Jupyter Notebook")
- + 3