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Cover image for Paired omics data platform

Paired omics data platform

If you do metabolomics experiments with mass spectra and have sequenced the genomes of the samples, then the platform can help you link them.

  • Inter-operability & linked data
  • TypeScript
  • JavaScript
  • HTML
  • + 3
2
99
Cover image for Vantage6

Vantage6

An open-source platform for supporting the development of federated learning projects

  • federated learning
  • healthcare
  • privacy preserving analysis
  • + 1
  • Python
  • TypeScript
  • HTML
  • + 6
8
45
Cover image for Research Software Directory

Research Software Directory

A content management system for research software, which promotes the visibility, reuse, and impact of research software.

  • FAIR
  • Research Software Impact
  • Software Citation
  • TypeScript
  • Java
  • PLpgSQL
  • + 7
25
38
Cover image for MDStudio

MDStudio

A tool to run molecular dynamics workflows.

  • High performance computing
  • Real time data analysis
  • Workflow technologies
  • Python
  • CSS
  • TypeScript
  • + 5
4
10
Cover image for cffinit

cffinit

A web form to initialize CITATION.cff files which you can use to include citation information into your software repository.

  • Software Citation
  • TypeScript
  • Vue
  • JavaScript
  • + 3
7
4
Cover image for evidence

evidence

doc2vec-based assisted close reading with support for abstract concept-based search and context-based search

  • TypeScript
  • Go
  • Jupyter Notebook
  • + 5
9
4
Cover image for PanVA

PanVA

Variant Analysis within Pangenomes.

  • API
  • Data Analysis
  • pangenomics
  • Vue
  • TypeScript
  • Python
  • + 6
2
2
Cover image for tortellini

tortellini

GitHub action to check whether any licensing issues exist for given software.

  • TypeScript
  • JavaScript
4
2
Cover image for IRIDA

IRIDA

Integrated Rapid Infectious Disease Analysis (IRIDA) platform is a user-friendly, distributed, open source bioinformatics and analytical web platform that was developed to support real-time infectious disease outbreak investigations using whole genome sequencing data.

  • genomics
  • infectious disease
  • Java
  • JavaScript
  • TypeScript
  • + 6
3
1
Cover image for i-VRESSE workflow-builder

i-VRESSE workflow-builder

Need to write a complex config file then the i-VRESSE workflow builder might be the tool for you.

  • Workflow technologies
  • TypeScript
  • Python
  • CSS
  • + 3
5
1
Cover image for LORIS

LORIS

Longitudinal Online Research and Imaging System (LORIS) is a web-based data and project management software for neuroimaging research studies. It is an OPEN SOURCE framework for storing and processing behavioural, clinical, neuroimaging and genetic data.

  • Computational Neuroscience
  • database
  • neuroimaging
  • + 3
  • PHP
  • JavaScript
  • TypeScript
  • + 9
8
1
Cover image for Umple

Umple

Umple allows generation of code in Java, PHP and other languages from a textual representation of UML state machines, associations and other modeling constructs, thus saving coding effort

  • Code Generation
  • Software Modeling
  • State Machines
  • + 1
  • Java
  • JavaScript
  • GAP
  • + 17
14
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