All software
Paired omics data platform
If you do metabolomics experiments with mass spectra and have sequenced the genomes of the samples, then the platform can help you link them.
- Inter-operability & linked data
- TypeScript
- JavaScript
- HTML
- + 3
Code and data underlying the publication: City3D: Large-scale Building Reconstruction from Airborne LiDAR Point Clouds
Code and data underlying the publication: City3D: Large-scale Building Reconstruction from Airborne LiDAR Point Clouds
- Building
- Point Cloud
- Surface-reconstruction
- + 1
- C
- C++
- Other
- + 8
Vantage6
An open-source platform for supporting the development of federated learning projects
- federated learning
- healthcare
- privacy preserving analysis
- + 1
- Python
- TypeScript
- HTML
- + 6
Research Software Directory
A content management system for research software, which promotes the visibility, reuse, and impact of research software.
- FAIR
- Research Software Impact
- Software Citation
- TypeScript
- Java
- PLpgSQL
- + 7
MDStudio
A tool to run molecular dynamics workflows.
- High performance computing
- Real time data analysis
- Workflow technologies
- Python
- CSS
- TypeScript
- + 5
cffinit
A web form to initialize CITATION.cff files which you can use to include citation information into your software repository.
- Software Citation
- TypeScript
- Vue
- JavaScript
- + 3
evidence
doc2vec-based assisted close reading with support for abstract concept-based search and context-based search
- Text analysis & natural language processing
- TypeScript
- Go
- Jupyter Notebook
- + 5
PanVA
Variant Analysis within Pangenomes.
- API
- Data Analysis
- pangenomics
- Vue
- TypeScript
- Python
- + 6
tortellini
GitHub action to check whether any licensing issues exist for given software.
- TypeScript
- JavaScript
IRIDA
Integrated Rapid Infectious Disease Analysis (IRIDA) platform is a user-friendly, distributed, open source bioinformatics and analytical web platform that was developed to support real-time infectious disease outbreak investigations using whole genome sequencing data.
- genomics
- infectious disease
- Java
- JavaScript
- TypeScript
- + 6
i-VRESSE workflow-builder
Need to write a complex config file then the i-VRESSE workflow builder might be the tool for you.
- Workflow technologies
- TypeScript
- Python
- CSS
- + 3
LORIS
Longitudinal Online Research and Imaging System (LORIS) is a web-based data and project management software for neuroimaging research studies. It is an OPEN SOURCE framework for storing and processing behavioural, clinical, neuroimaging and genetic data.
- Computational Neuroscience
- database
- neuroimaging
- + 3
- PHP
- JavaScript
- TypeScript
- + 9