Software

spec2vec is a novel similarity measure for comparing mass spectrometry data, which learns peak representations using Word2Vec.

Python library for fuzzy comparison of mass spectrum data and other Python objects

If you are using remote machines to do your computations, and don’t feel like learning and implementing many different APIs, Xenon is the tool for you.

A command line interface for the Xenon library that allows you to use remote machines to do your computations.

A Python environment to interface and couple oceanographic and other earth system model codes.

Java library for identifier mapping

Automatic classification of accelerometer data using a supervised learning approach.

LUE is software for storing and manipulating large amounts of information for large numbers of objects. The software is useful, and currently mainly used, in the context of environmental modelling of biological and physical systems, represented by agents and fields.

The nanopub library provides a high-level, user-friendly python interface for searching, publishing and retracting nanopublications.

Generic template for Python packages, so you can spend less time setting up and configuring, and comply with the Netherlands eScience Center Software Development Guide from the start.

Combine existing numerical codes in an easy to use Python framework. With AMUSE you can simulate objects such as star clusters, proto-planetary disks and galaxies.

OpenMS is an open-source software C++ library for LC-MS data management and analyses. It offers an infrastructure for rapid development of mass spectrometry related software. OpenMS is free software available under the three clause BSD license and runs under Windows, macOS, and Linux.