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Cover image for PSSMGen

PSSMGen

Generates consistent PSSM and PDB files for protein-protein complexes

  • Big data
  • High performance computing
  • Optimized data handling
  • Python
  • Makefile
2
2
Cover image for python-pcl

python-pcl

Use the industry-standard Point Cloud Library from within Python.

  • Big data
  • High performance computing
  • Python
  • C++
  • Makefile
  • + 2
4
0
Cover image for QMCTorch

QMCTorch

Use and design neural network ansatz wave function for real-space quantum Monte Carlo simulations of molecular systems.

  • Computational Chemistry
  • GPU
  • High performance computing
  • + 2
  • Python
  • TeX
2
0
Cover image for QUICKLB

QUICKLB

QUICKLB is a very efficient library that sacrifices optimality for speed. It shines in distributed applications that have unpredictable unbalanced computational peaks in their domains.

  • Computational Fluid Dynamics (CFD)
  • Fortran
  • High performance computing
  • + 2
  • Fortran
  • Python
  • CMake
2
0
Cover image for Rocket

Rocket

Rocket is a framework for efficient execution of all-pair applications on heterogeneous platforms.

  • Big data
  • GPU
  • High performance computing
  • + 1
  • Java
  • Cuda
  • C++
  • + 2
1
0
Cover image for Rucio deployment for KM3NeT

Rucio deployment for KM3NeT

This repository contains the Rucio deployment for KM3NeT. It can be used as an example of how to deploy Rucio.

  • Big data
  • High performance computing
    2
    0
    Cover image for Sagecal

    Sagecal

    Fast, memory efficient and GPU accelerated radio interferometric calibration program

    • Big data
    • GPU
    • High performance computing
    • C
    • C++
    • Cuda
    • + 5
    4
    1
    Cover image for self-hosted runners

    self-hosted runners

    Collection of resources to set up GitHub runners on self-hosted infrastructure

    • High performance computing
    • Shell
    • Dockerfile
    5
    1
    Cover image for GitHub action to set up apptainer

    GitHub action to set up apptainer

    GitHub action for setting up apptainer in a Continous Integration job

    • High performance computing
    • TypeScript
    • Shell
    • JavaScript
    2
    0
    Cover image for Slurm time on Jupyter

    Slurm time on Jupyter

    Display Slurm job remaining time in Jupyter top bar

    • High performance computing
    • jupyter notebooks
    • SLURM
    • Python
    • TypeScript
    • JavaScript
    • + 1
    0
    0
    Cover image for sv-callers

    sv-callers

    Highly portable parallel workflow to detect structural variants in cancer genomes.

    • Big data
    • High performance computing
    • Workflow technologies
    • Python
    • Shell
    4
    30
    Cover image for sv-gen

    sv-gen

    Highly portable parallel workflow to generate artificial genomes with structural variants.

    • Big data
    • High performance computing
    • Workflow technologies
    • Python
    • Shell
    5
    0