Netherlands eScience Center
National platform for the development and application of domain overarching software and methods for the scientific community
MDStudio
A tool to run molecular dynamics workflows.
- High performance computing
- Real time data analysis
- Workflow technologies
- (CSS)
- (Dockerfile)
- (HTML)
- + 5
mexca
Capture emotion expressions from video, audio, and text with a single pipeline.
- Audio processing
- Image processing
- Machine learning
- + 1
- (Dockerfile)
- (Python)
- (Shell)
mibiremo
MiBiReMo (Microbiome Bioremediation Reaction Module) is a Python interface to the PhreeqcRM library. The package is designed to be coupled with transport models to simulate reactive transport in porous media, with applications in environmental and geochemical engineering.
- (Makefile)
- (Python)
mibiscreen
Data handling and screening package of the Microbiome based remediation Prediction Tool
- Data Analysis
- Multi-scale & multi model simulations
- python
- ("Jupyter Notebook")
- (Python)
- (Shell)
mibitrans
A collection of analytical and semi-semianalytical solutions for hydrogeological transport phenomena
- Multi-scale & multi model simulations
- python
- (Python)
- (Shell)
minimism
A minimal distributed MPI port from UFEMISM, used as a basis for UFEMISM2.0
- Finite volume method
- ice sheet
- MPI
- + 1
- (Fortran)
- (Makefile)
- (Mathematica)
- + 4
Mixed Meal Model SBML
This software generates the SBML version of the Mixed Meal Model, for predicting the glucose level evolution after the intake of a meal.
- Digital Twins
- modelling
- (Python)
- (Shell)
mkdocs rich argparse
An MkDocs plugin to generate documentation for a rich argparse parser. It renders commands, sub commands and sub-sub commands which can have rich help messages.
- python
- (Python)
MMSODA Toolbox for MATLAB
MATLAB toolbox for global optimization and state estimation of dynamic models using distributed computing.
- (Batchfile)
- (C)
- (CSS)
- + 5
MOTrainer
Measurement Operator Trainer for data assimilation purposes.
- Data assimilation
- High performance computing
- Machine learning
- + 2
- ("Jupyter Notebook")
- (Python)
- (Shell)
- + 1
MPET
This software is designed to run simulations of batteries with porous electrodes using porous electrode theory, which is a volume-averaged, multiscale approach to capture the coupled behavior of electrolyte and active material within electrodes
- (Dockerfile)
- (Python)
MS2DeepScore
Deep learning based similarity measure of mass spectrometry data.
- ("Jupyter Notebook")
- (Python)