Netherlands eScience Center
National platform for the development and application of domain overarching software and methods for the scientific community
minimism
A minimal distributed MPI port from UFEMISM, used as a basis for UFEMISM2.0
- Finite volume method
- ice sheet
- MPI
- + 1
- Fortran
- MATLAB
- Mathematica
- + 4
Mixed Meal Model SBML
This software generates the SBML version of the Mixed Meal Model, for predicting the glucose level evolution after the intake of a meal.
- Digital Twins
- modelling
- Python
- Shell
mkdocs rich argparse
An MkDocs plugin to generate documentation for a rich argparse parser. It renders commands, sub commands and sub-sub commands which can have rich help messages.
- python
- Python
MMSODA Toolbox for MATLAB
MATLAB toolbox for global optimization and state estimation of dynamic models using distributed computing.
- HTML
- MATLAB
- TeX
- + 5
MOTrainer
Measurement Operator Trainer for data assimilation purposes.
- Data assimilation
- High performance computing
- Machine learning
- + 2
- Jupyter Notebook
- Python
- TeX
- + 1
MPET
This software is designed to run simulations of batteries with porous electrodes using porous electrode theory, which is a volume-averaged, multiscale approach to capture the coupled behavior of electrolyte and active material within electrodes
- Python
- Dockerfile
MS2DeepScore
Deep learning based similarity measure of mass spectrometry data.
- Jupyter Notebook
- Python
MUSCLE3
MUSCLE3 is a coupling library for building multiscale simulations out of single-scale models.
- High performance computing
- Multi-scale & multi model simulations
- Fortran
- C++
- Python
- + 4
nanomesh
Python workflow tool for generating meshes from 2D and 3D microscopy image data
- Image processing
- Visualization
- Workflow technologies
- Jupyter Notebook
- Python
- Shell
- + 1
nanopub
The nanopub library provides a high-level, user-friendly python interface for searching, publishing and retracting nanopublications.
- Inter-operability & linked data
- Python
- Shell
- Batchfile
NanopubJL
JupyterLab extension to aid in searching and publishing of Nanopublications in a python notebook
- Inter-operability & linked data
- TypeScript
- Python
- JavaScript
- + 3
NEBULA
The NEBULA (Nuxt & eScience Based Universal Learning Application) framework can be used to create an easily maintainable, version-controllable, web-based lesson collection. It uses Nuxt.js and Vue.js.
- teaching
- web
- Vue
- TypeScript
- SCSS
- + 1