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Cover image for MMSODA Toolbox for MATLAB

MMSODA Toolbox for MATLAB

MATLAB toolbox for global optimization and state estimation of dynamic models using distributed computing.

  • HTML
  • MATLAB
  • TeX
  • + 5
3
1
Cover image for Open Computational Multiphysics

Open Computational Multiphysics

OpenCMP is a computational multiphysics software package based on the finite element method

  • Computational Fluid Dynamics (CFD)
  • computational Multiphysics
  • diffuse interface method
  • + 3
  • Python
  • TeX
1
1
Cover image for PyChelator

PyChelator

PyChelator is a Python-based Colab and web application for metal chelator calculations, taking into account pH, temperature, and ionic strength. The build-in constants can be used for EGTA and ATP as chelators, together with Calcium and Magnesium as metals. User-defined constants can be used.

  • application
  • calcium
  • chelator
  • + 7
  • Jupyter Notebook
  • JavaScript
  • HTML
  • + 2
3
1
Cover image for asrlitcompare

asrlitcompare

A tool written in rmarkdown for assessing the level of agreement between two raters following screening in ASReview. Users only need the two .csv files downloaded from ASReview, and the tool will automatically compile a summary report as an HTML file, viewable in your web browser.

  • ASReview
  • inter-rater reliability
  • literature screening
  • + 1
  • HTML
  • C++
  • JavaScript
  • + 14
2
0
Cover image for BridgeDbR

BridgeDbR

R package for the BridgeDb Java library making identifier mapping functionality available in the R environment.

  • persistent identifiers
  • Statistics
  • R
  • TeX
  • HTML
0
0
Cover image for Canadian Writing Research Collaboratory (CWRC)

Canadian Writing Research Collaboratory (CWRC)

CWRC aims to make digital research methods broadly accessible, and to develop an active community of researchers engaged in exploring the potential of collaboration online.

  • Canadian culture & history
  • cultural studies
  • digital humanities
  • + 1
  • JavaScript
  • PHP
  • HTML
  • + 16
1
0
Cover image for Ceiba

Ceiba

Ceiba and its command-line interface Ceiba-cli solve the problem of computing, storing, and securely sharing computationally expensive simulation results.

  • Optimized data handling
  • Python
  • TeX
  • Shell
  • + 1
2
0
Cover image for cleanX

cleanX

CleanX is an open-source python library for exploring, cleaning and augmenting large datasets of X-rays, or certain other types of radiological images.

  • Image processing
  • Machine learning
  • Jupyter Notebook
  • Python
  • TeX
  • + 3
1
0
Cover image for HORTON

HORTON

HORTON is a Helpful Open-source Research Tool for N-fermion systems, written primarily in the Python programming language. The ultimate goal of HORTON is to provide a platform for testing new ideas on the quantum many-body problem at a reasonable computational cost.

  • electronic structure theory
  • quantum chemistry
  • Python
  • C++
  • Cython
  • + 6
1
0
Cover image for HPGEM

HPGEM

hpGEM is a C++ partial differential equation solver. It is intended for Discontinuous Galerkin Finite Element Methods, but can also do normal (conforming) Finite Element Methods and Finite Volume.

  • Finite Element
  • High performance computing
  • C++
  • CMake
  • TeX
  • + 6
4
0
Cover image for OpenDA

OpenDA

Open data assimilation toolbox. OpenDA is an open interface standard for a set of tools to quickly implement data-assimilation and calibration for arbitrary numerical models.

  • Optimized data handling
  • Java
  • Fortran
  • Python
  • + 22
4
0
Cover image for parareal

parareal

This package runs the parareal algorithm on a black-box simulator. Parallelisation is managed through Dask.

  • High performance computing
  • Numerical analysis
  • CSS
  • Jupyter Notebook
  • Python
  • + 5
2
0