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COPASI
COPASI is an open source software for simulation and analysis of biochemical networks and their dynamics. It provides simulations using ODEs, SDEs, or Gillespie's stochastic simulation algorithm, with optional discrete events. COPASI provides several analyses, optimization, and parameter estimation.
- Dynamics
- optimization
- Parameter estimation
- + 3
- C++
- Java
- Fortran
- + 17
12
2704
doc2sentences
A python library to split sentence-wise and convert various document formats to CSV format.
- CSV
- python
- + 1
- Rich Text Format
- Python
- Shell
2
0
UFEMISM2.0
The successor of UFEMISM, has all of its features (and more?), but is based on the distributed architecture introduced in minimism.
- Finite volume method
- ice sheet
- MPI
- + 1
- Fortran
- MATLAB
- Python
- + 6
4
0