Ctrl KSoftwareProjectsOrganisationsFeedback Send feedbackSign inCtrl KLimited functionality: Your browser does not support JavaScript.Software HighlightsBrowse all HighlightsAll software1FilterClearOrder byOrder byKeywords98Program languages66Licenses13121-12 of 373D Slicer3D Slicer is a free, open source software for visualization, processing, segmentation, registration, and analysis of medical, biomedical, and other 3D images and meshes; and planning and navigating image-guided procedures.3D3DSlicerExtension+ 7C++PythonCMake+ 545AMUSECombine existing numerical codes in an easy to use Python framework. With AMUSE you can simulate objects such as star clusters, proto-planetary disks and galaxies.High performance computingMulti-scale & multi model simulationsWorkflow technologiesAMPLCFortran+ 2566ArpraArpra is a C library for analyzing the propagation of numerical error in arbitrary precision IEEE-754 floating-point computations.Affine ArithmeticArbitrary PrecisionInterval Arithmetic+ 2CMakefileM410asrlitcompareA tool written in rmarkdown or assessing the level of agreement between two raters following screening in ASReview. Users only need the two .csv files downloaded from ASReview, and the tool will automatically compile a summary report as an HTML file, viewable in your web browser.ASReviewinter-rater reliabilityliterature screening+ 1HTMLC++JavaScript+ 1420compareMS2compareMS2 is a tool for direct comparison of tandem mass spectrometry datasets, typically from liquid chromatography-tandem mass spectrometry (LC-MS/MS), defining a distance as a function of the share of similar spectra. Applications span biomedicine, phylogenetics, forensics and food science.Forensicsmass spectrometryphylogenetics+ 1JavaScriptCHTML+ 2214COMPAS ToolkitThe Compas Toolkit is a C++ library designed for use in quantitative MRI research, with GPU acceleration.GPUHigh performance computingMRIC++CudaJulia+ 330DALESDALES is a large-eddy simulation code designed for studies of the physics of the atmospheric boundary layer, including convective and stable boundary layers as well as cloudy boundary layers. FortranCTeX+ 82411DeepRankDeep learning framework for data mining protein-protein interactions using CNNBig dataMachine learningOptimized data handlingPythonRC+ 2860DuMuxDuMux is short for "DUNE for Multi-{Phase, Component, Scale, Physics, …} flow and transport in porous media". It is an open-source simulator and research code in modern C++. It provides a framework for the implementation and application of porous media model concepts and constitutive relations.porous mediaSimulationC++CMakePython+ 210eAstroVizThis tool can convert and visualize radio astronomy measurement sets, as well as most LOFAR intermediate data products. It also performs RFI mitigation.JavaC++Cuda+ 313ExploreASLExploreASL is a pipeline and toolbox for image processing and statistics of arterial spin labeling perfusion MR images. It is designed as a multi-OS, open-source, collaborative framework that facilitates cross-pollination between image processing method developers and clinical investigators.ASLImage processingMRIMATLABCPython711FastMLCDetect clusters in for example large collections of DNA or protein sequences, and visualize the results in a web browser.Big dataMachine learningVisualizationC++CMakefile+ 5521234
